Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule ▼ | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
68-kDa proteins
|
N-Acetylneuraminic acid
|
Monosaccharides
|
Bronchial lavages of sheep with pneumonic pasteurelosis
|
NeuAc
|
Binding
|
||
|
66-kDa subunit
|
Asialo-GM2 (Gangliotriosylceramide; GgO3)
|
Oligoglycosylceramides
|
Human buccal epihelial cells (BECs)
|
GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
66-kDa subunit
|
Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)
|
Oligoglycosylceramides
|
Human buccal epihelial cells (BECs)
|
Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
52-kDa recombinant fusion proteins
|
N-Acetylgalactosamine
|
Monosaccharides
|
GalNAc
|
Binding
|
|||
|
52-kDa recombinant fusion proteins
|
Galactose
|
Monosaccharides
|
Gal
|
Binding
|
|||
|
5 bacterial surface proteins (50 to 90-kDa)
|
Phosphatidylethanolamine (PE)
|
Non-glycosylated Lipids
|
HEp-2 cells
|
Binding
|
|||
|
36-kDa proteins
|
Asialo-GM2 (Gangliotriosylceramide; GgO3)
|
Oligoglycosylceramides
|
Mucos membranes of the genitourinary tract/rectum/oropharynx/conjunctiva
|
GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
36-kDa proteins
|
Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)
|
Oligoglycosylceramides
|
Mucos membranes of the genitourinary tract/rectum/oropharynx/conjunctiva
|
Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
36-kDa proteins
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
|
36-kDa proteins
|
Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)
|
Oligoglycosylceramides
|
Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
Displaying entries 1771 - 1780 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
