GlyCosmos Portal

Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database	Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB)	June 1, 2016

Species	Pathogen Adherence Molecule	Ligand Name	Ligand Feature	Target Source	Glycan Sequence	Binding ▼	PubMed ID
Salmonella typhimurium	Unknown	Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)	Oligoglycosylceramides		Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer	Binding	12628483
Coxsackievirus	Unknown	Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)	Oligoglycosylceramides		Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer	Binding	2168971
Pseudomonas cepacia	Unknown	Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)	Oligoglycosylceramides		Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer	Binding	12628483
Rotavirus	Unknown	Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)	Oligoglycosylceramides		Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer	Binding	8574698
Pseudomonas maltophilia	Unknown	Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)	Oligoglycosylceramides		Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer	Binding	3413084
Actinobacillus pleuropneumoniae	LPS	Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)	Oligoglycosylceramides		Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer	Binding	10496867
Norovirus	Capsid proteins	Blood group H1 antigen	Oligosaccharides		Fuc(a1-2)Gal(b1-3)GlcNAc	Binding	18809496
Enterococcus faecalis	EfaA (Lary family)	D-Galactose-containing residues	Saccharides		Gal	Binding	12640357
Paramyxovirus	Unknown	116 kDa glycoprotein (containing sialic acid residues with N-linked glycans)	N-glycans	Neurones of all brain regions		Binding	11666031
Polyoma virus	Capsid VP1	GD1a-GT1b analog	Sialoglycosphingolipids	(broad range)		Binding	18809496