Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB) June 1, 2016
Species Pathogen Adherence Molecule Ligand Name ▲ Ligand Feature Target Source Glycan Sequence Binding PubMed ID
Unknown
unnamed ligand
Oligoglycosylceramides
GalNAc(b1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
Binding
Type 2-fimbriae
unnamed ligand
Oligosaccharides
Gal(b1-4)Glc
Binding
Type 2-fimbriae
unnamed ligand
Oligosaccharides
Gal(b1-4)Glc
Binding
Verotoxin (1)
unnamed ligand
Oligosaccharides
Gal(a1-4)Gal(b1-4)Glc(b
Binding
Unknown
unnamed ligand
Oligosaccharides
Gal(b1-4)Glc(b
Binding
Unknown
unnamed ligand
Oligosaccharides
Fuc(a1-2)Gal(b1-3)[Fuc(a1-4)]Gal
Binding
Unknown
unnamed ligand
Oligosaccharides
Gal(a1-4)Gal(b1-4)Glc(b
Binding
Shiga toxin
unnamed ligand
Polyglycosylceramides
GalNAc(b1-3)[Gal(a1-3)]nGal(a1-4)Gal(b1-4)Glc(b1-1)Cer *n=1-5
Not Binding
Unknown
unnamed ligand
Polyglycosylceramides
GalNAc(b1-3)[Gal(a1-3)]nGal(a1-4)Gal(b1-4)Glc(b1-1)Cer *n=1-5
Binding
Unknown
unnamed ligand
Polyglycosylceramides
GalNAc(b1-3)[Gal(a1-3)]nGal(a1-4)Gal(b1-4)Glc(b1-1)Cer *n=1-5
Not Binding
Displaying entries 1781 - 1790 of 1840 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01