PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence ▲ | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
PN
|
unnamed ligand
|
Oligosaccharides
|
human erythrocytes
|
Gal(a1-4)Gal
|
Binding
|
||
PA-IL (51-kDa)
|
Galactose-alpha-1,4-galactose
|
Disaccharides
|
Gal(a1-4)Gal
|
Binding
|
|||
PrsG
|
Gal alpha 1-4 Gal-containing glicolipids
|
Glycolipids
|
Gal(a1-4)Gal
|
Binding
|
|||
PapG
|
Gal alpha 1-4 Gal-containing glicolipids
|
Glycolipids
|
Gal(a1-4)Gal
|
Binding
|
|||
Adhesins
|
P1 antigen (GSL)
|
Glycosphingolipids
|
Gal(a1-4)Gal
|
Binding
|
|||
PapG
|
Gal(a1-4)Gal in globo-series of glycolipids
|
Glycosphingolipids
|
Gal(a1-4)Gal
|
Binding
|
|||
PrsG
|
Gal(a1-4)Gal in globo-series of glycolipids
|
Glycosphingolipids
|
Gal(a1-4)Gal
|
Binding
|
|||
FimD
|
unnamed ligand
|
Oligosaccharides
|
Gal(a1-4)Gal
|
Binding
|
|||
P-fimbriae
|
unnamed ligand
|
Oligosaccharides
|
Gal(a1-4)Gal
|
Binding
|
|||
18-kDa proteins
|
unnamed ligand
|
Oligosaccharides
|
Gal(a1-4)Gal
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01