PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding ▲ | PubMed ID |
---|---|---|---|---|---|---|---|
PO
|
unnamed ligand
|
Oligosaccharides
|
human erythrocytes
|
Gal(a1-4)Gal
|
Binding
|
||
Type 1-fimbriae
|
trisaccharide: Man(a1-3)Man(b1-4)GlcNAc
|
Oligosaccharides
|
Patient with urinary tract infection
|
Man(a1-3)Man(b1-4)GlcNAc
|
Binding
|
||
Toxin A
|
unnamed ligand
|
Oligosaccharides
|
Human colonic cells
|
Gal(a1-3)Gal(b1-4)GlcNAc
|
Binding
|
||
C-terminal domain of toxin A molecules
|
unnamed ligand
|
Oligosaccharides
|
Human colonic cells
|
Gal(a1-3)Gal(b1-4)GlcNAc
|
Binding
|
||
PN
|
unnamed ligand
|
Oligosaccharides
|
human erythrocytes
|
Gal(a1-4)Gal
|
Binding
|
||
Adhesins
|
unnamed ligand
|
Oligosaccharides
|
Human epithelial cells (respiratory tract)
|
Gal(b1-4)GlcNAc
|
Binding
|
||
FimH
|
Mannose oligosaccharides
|
Oligosaccharides
|
Eukaryotic cells
|
Man
|
Binding
|
||
Unknown
|
Tetrasaccharides
|
Oligosaccharides
|
Respiratory tract
|
Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)GlcNAc
|
Binding
|
||
Unknown
|
unnamed ligand
|
Oligosaccharides
|
Intestinal cells
|
Fuc(a1-2)Gal(b1-4)GlcNAc
|
Binding
|
||
Unknown
|
unnamed ligand
|
Oligosaccharides
|
Respiratory tract
|
Gal(b1-3)GlcNAc(b1-3)Gal(b1-4)Glc
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01