PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source ▼ | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Hsa
|
unknown carbohydrate ligand
|
Saccharides
|
Platelet
|
Binding
|
|||
Type 2-fimbriae
|
β-linked galactosamine
|
Saccharides
|
Plaque
|
GalNAc(b 2:2
|
Binding
|
||
Type 2-fimbriae
|
β-linked galactosamine
|
Saccharides
|
Plaque
|
GalNAc(b 2:2
|
Binding
|
||
Type 2-fimbriae
|
β-linked galactosamine
|
Saccharides
|
Plaque
|
GalNAc(b 2:2
|
Not Binding
|
||
Type 2-fimbriae
|
β-linked galactosamine
|
Saccharides
|
Plaque
|
GalNAc(b 2:1
|
Binding
|
||
Type 2-fimbriae
|
β-linked galactosamine
|
Saccharides
|
Plaque
|
GalNAc(b 2:1
|
Not Binding
|
||
Type 2-fimbriae
|
β-linked galactosamine
|
Saccharides
|
Plaque
|
GalNAc(b 2:1
|
Not Binding
|
||
35S-labeled or 125I-labeled proteins
|
GM3(NeuGc)
|
Monosialoglycosphingolipids
|
Piglet intestine
|
NeuGc(a2-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
35S-labeled or 125I-labeled proteins
|
Sulfatide (CSE)
|
Sulfoglycosphingolipids
|
Piglet intestine
|
HSO3(-3)Gal(b1-1)Cer
|
Not Binding
|
||
35S-labeled or 125I-labeled proteins
|
Sulfo-lactosylceramide (SM3)
|
Sulfoglycosphingolipids
|
Piglet intestine
|
HSO3(-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01