Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence ▲ | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
Unknown
|
Heparin (N-desulfated, N-acetylated)
|
Glycosaminoglycans
|
Vero cells
|
Binding
|
|||
|
Unknown
|
Heparin (completely desulfated, N-acetylated)
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
|||
|
Hemagglutinin (HA)
|
Gangliosides
|
Glycosphingolipids
|
Human leukocytes
|
Binding
|
|||
|
LecB
|
alpha-methyl-fucoside
|
Monosaccharides
|
A549 cells
|
Binding
|
|||
|
LecA
|
Alpha-methyl-galactoside
|
Monosaccharides
|
A549 cells
|
Binding
|
|||
|
K88ab
|
GlcNAc residues in the core of N-glycan on pSTf (porcine serum transferrin)
|
N-glycans
|
Porcine serum
|
Binding
|
|||
|
Glycoprotein (GP)
|
O-mannosyl glycans on alpha-dystroglycan (DG)
|
O-glycans
|
Fibroblasts, Epithelial cells, Endothelial cells, Hepatocytes
|
Binding
|
|||
|
Glycoprotein (GP)
|
O-mannosyl glycans on alpha-dystroglycan (DG)
|
O-glycans
|
Fibroblasts, Epithelial cells, Endothelial cells, Hepatocytes
|
Binding
|
|||
|
DbpA
|
Decorin
|
Proteoglycans
|
Extracellular matrix (ECM)
|
Binding
|
|||
|
Lectin-like component
|
unknown carbohydrate ligand
|
Saccharides
|
Human erythrocytes
|
Binding
|
Displaying entries 1791 - 1800 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
