Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID ▼ |
|---|---|---|---|---|---|---|---|
|
Lectin-like proteins (adhesin)
|
unnamed ligand
|
Oligosaccharides
|
Gal(b1-3)GalNAc
|
Binding
|
|||
|
Lectin-like proteins (adhesin)
|
Mr 36,900 PRG (Proline-Rich Glycoprotein)
|
Glycoproteins
|
Binding
|
||||
|
Lectin-like proteins (adhesin)
|
Mr 89,000 PRG (Proline-Rich Glycoprotein)
|
Glycoproteins
|
Binding
|
||||
|
Envelope glycoprotein gp120
|
Galactosyl sulfatide
|
Sulfoglycosphingolipids
|
Neural receptor
|
HSO3(-3)Gal(b1-1)Cer
|
Binding
|
||
|
Envelope glycoprotein gp120
|
Galactosylceramide (Galactocerebroside)
|
Monoglycosylceramides
|
Neural receptor
|
Gal(b1-1)Cer
|
Binding
|
||
|
HIV surface glycoprotein gp120
|
Galactosylceramide (Galactocerebroside)
|
Monoglycosylceramides
|
Neural cell lines
|
Gal(b1-1)Cer
|
Binding
|
||
|
FnBPB (fibronectin binding protein)
|
Fibronectin
|
Glycoproteins
|
Binding
|
||||
|
FnBPA (fibronectin binding protein)
|
Fibronectin
|
Glycoproteins
|
Binding
|
||||
|
Unknown
|
GD1a
|
Disialoglycosphingolipids
|
NeuAc(a2-3)Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
|
Unknown
|
GD3(NeuAc)
|
Disialoglycosphingolipids
|
NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
Displaying entries 1791 - 1800 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
