PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence ▲ | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
(class III)
|
GL-III glycolipid
|
Glycolipids
|
Not Binding
|
||||
(class I/III)
|
GL-II glycolipid
|
Glycolipids
|
Not Binding
|
||||
P-fimbriae
|
GL-III glycolipid
|
Glycolipids
|
Not Binding
|
||||
SpsA
|
IgA
|
Glycoproteins
|
Binding
|
||||
CsgA (curli)
|
Human contact phase proteins
|
Glycoproteins
|
Binding
|
||||
Type 1-fimbriae
|
alpha-Mannosyl groups on glycoproteins
|
Glycoproteins
|
Binding
|
||||
Pertussis toxin
|
Haptoglobin
|
Glycoproteins
|
Binding
|
||||
AgfA (curli)
|
Human contact phase proteins
|
Glycoproteins
|
Binding
|
||||
PspC (Lary family) (alias: SpsA/CbpA/PbcA/Hic)
|
IgA
|
Glycoproteins
|
Binding
|
||||
Lectin-like proteins (adhesin)
|
Mr 36,900 PRG (Proline-Rich Glycoprotein)
|
Glycoproteins
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01