PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID ▼ |
---|---|---|---|---|---|---|---|
PT (subunit S3 of B oligomer)
|
Gangliosides
|
Sialoglycosphingolipids
|
Human alveolar macrophages
|
Binding
|
|||
Pertussis toxin
|
Gangliosides
|
Sialoglycosphingolipids
|
Human alveolar macrophages
|
Binding
|
|||
Pertussis toxin
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Human cilia of the respiratory epithelium
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
PT (subunit S2 of B oligomer)
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Human cilia of the respiratory epithelium
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Pertussis toxin
|
Haptoglobin
|
Glycoproteins
|
Binding
|
||||
PT (subunit S2 of B oligomer)
|
Haptoglobin
|
Glycoproteins
|
Binding
|
||||
Exoenzyme S
|
Asialo-GM2 (Gangliotriosylceramide; GgO3)
|
Oligoglycosylceramides
|
GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
Exoenzyme S
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
Exoenzyme S
|
Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)
|
Oligoglycosylceramides
|
Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
Protein F (Antigen I/II)
|
Fibronectin
|
Glycoproteins
|
Respiratory epithelial cells
|
Binding
|
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01