PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source ▼ | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
FHA (442-863)
|
Dextran sulfate
|
Polysaccharides
|
WiDr cells, HeLa cells, Vero cells, Extracellular matrix (ECM)
|
Binding
|
|||
Unknown
|
isoGb3 (Isoglobotriaosylceramide; iGb3)
|
Oligoglycosylceramides
|
Whole dog small intestine
|
Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Unknown
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Whole dog small intestine
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Unknown
|
Chondroitin 6-sulfate (C-6S)
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
|||
Unknown
|
Heparan sulfate (fraction: HS-A)
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
|||
Unknown
|
Heparan sulfate (fraction: HS-A)
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
|||
Unknown
|
Heparan sulfate (fraction: HS-A)
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
|||
Unknown
|
Heparan sulfate (fraction: HS-A)
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
|||
Unknown
|
Dermatan sulfate
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
|||
Unknown
|
Heparan sulfate (fraction: HS-D)
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01