Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source ▼ | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
FHA (442-863)
|
Dextran sulfate
|
Polysaccharides
|
WiDr cells, HeLa cells, Vero cells, Extracellular matrix (ECM)
|
Binding
|
|||
|
Unknown
|
isoGb3 (Isoglobotriaosylceramide; iGb3)
|
Oligoglycosylceramides
|
Whole dog small intestine
|
Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
Unknown
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Whole dog small intestine
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
Unknown
|
Chondroitin 6-sulfate (C-6S)
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
|||
|
Unknown
|
Heparan sulfate (fraction: HS-A)
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
|||
|
Unknown
|
Heparan sulfate (fraction: HS-A)
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
|||
|
Unknown
|
Heparan sulfate (fraction: HS-A)
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
|||
|
Unknown
|
Heparan sulfate (fraction: HS-A)
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
|||
|
Unknown
|
Dermatan sulfate
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
|||
|
Unknown
|
Heparan sulfate (fraction: HS-D)
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
Displaying entries 11 - 20 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
