GlyCosmos Portal

Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database	Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB)	June 1, 2016

Species	Pathogen Adherence Molecule	Ligand Name ▼	Ligand Feature	Target Source	Glycan Sequence	Binding	PubMed ID
Actinomyces odontolyticus	Type 2-fimbriae	β-linked galactosamine	Saccharides	Buccae	GalNAc(b 2:1	Not Binding	9712794
Actinomyces naeslundii	Type 2-fimbriae	β-linked galactosamine	Saccharides	Buccae	GalNAc(b 2:1	Binding	9712794
Actinomyces odontolyticus	Type 2-fimbriae	β-linked galactosamine	Saccharides	Plaque	GalNAc(b 2:1	Not Binding	9712794
Escherichia coli	F1C	β-GalNac-1,4-β-Gal-containing structures	Saccharides		GalNAc(b1-4)Gal(b	Binding	11401961
Clostridium difficile	Toxin A	β-Gal on Fab of IgG3(λ) MAb	Glycoproteins	Mouse	Gal	Binding	9573079
Clostridium difficile	Unknown	β-Gal on Fab of IgG3(λ) MAb	Glycoproteins	Mouse	Gal	Binding	9573079
Escherichia coli	Type 1-fimbriae	β-D-glycosides	Glycoconjugates	Patient with urinary tract infection		Binding	6138149
Entamoeba histolytica	Transmembrane heavy subunit (Hgl; 170-kDa) disulfide linked to a GPI-anchored light subunit (Lgl; 31-to 35-kDa).	β-2 and β-7 integrins	Glycoproteins	Intestinal cells		Binding	15322032
Entamoeba histolytica	Raft-like plasma membrane domains	β-2 and β-7 integrins	Glycoproteins	Intestinal cells		Binding	15322032
Foot-and-mouth disease virus	RGD motif of the VP1 GH loop	αvβ6 Integrin	Glycoproteins	Epithelial cells		Binding	10799568