PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species ▼ | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
PsaA/B (pH-6 antigen)
|
Galactosylceramide (nonhydroxylated fatty acids)
|
Monoglycosylceramides
|
Gal(b1-1)Cer
|
Not Binding
|
|||
PsaA/B (pH-6 antigen)
|
Glucosylceramide
|
Monoglycosylceramides
|
Glc(b1-1)Cer
|
Not Binding
|
|||
PsaA/B (pH-6 antigen)
|
Galactosylceramide (hydroxylated fatty acids)
|
Monoglycosylceramides
|
Gal(b1-1)Cer
|
Binding
|
|||
PsaA/B (pH-6 antigen)
|
Gb4 (Globoside; Globotetraose; P antigen)
|
Oligoglycosylceramides
|
GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
PsaA/B (pH-6 antigen)
|
Gb5 (Forssman glycolipid)
|
Oligoglycosylceramides
|
GalNAc(a1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
PsaA/B (pH-6 antigen)
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
PsaA/B (pH-6 antigen)
|
Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)
|
Oligoglycosylceramides
|
Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
PsaA/B (pH-6 antigen)
|
Gb3 (Globotriaosylceramide; Trihexosylceramide; Pk antigen (GSL); CTH)
|
Oligoglycosylceramides
|
Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
CBP (chitin-binding proteins) 53-kDa
|
N-Acetylglucosamine
|
Monosaccharides
|
GlcNAc
|
Binding
|
|||
MSHA (mannose/glucose-specific hemagglutinin)
|
Mannose
|
Monosaccharides
|
Patient with acute watery diarrhea
|
Man
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01