PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence ▲ | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
F1C
|
Gb2 (Galabiosylceramide)
|
Diosylceramides
|
Synthetic
|
Gal(a1-4)Gal(b1-1)Cer
|
Not Binding
|
||
Lectin-like proteins (adhesin)
|
Gb2 (Galabiosylceramide)
|
Diosylceramides
|
Gonorrhoeae patients
|
Gal(a1-4)Gal(b1-1)Cer
|
Not Binding
|
||
PapG (class II)
|
Gb2 (Galabiosylceramide)
|
Diosylceramides
|
Epithelial cells in human urinary tract
|
Gal(a1-4)Gal(b1-1)Cer
|
Binding
|
||
Unknown
|
Gb2 (Galabiosylceramide)
|
Diosylceramides
|
Human meconium
|
Gal(a1-4)Gal(b1-1)Cer
|
Not Binding
|
||
B subunit
|
Gb2 (Galabiosylceramide)
|
Diosylceramides
|
Human meconium
|
Gal(a1-4)Gal(b1-1)Cer
|
Binding
|
||
Unknown
|
Gb2 (Galabiosylceramide)
|
Diosylceramides
|
Human meconium
|
Gal(a1-4)Gal(b1-1)Cer
|
Not Binding
|
||
Adhesins
|
Gb2 (Galabiosylceramide)
|
Diosylceramides
|
Gal(a1-4)Gal(b1-1)Cer
|
Binding
|
|||
P-fimbriae
|
Gb2 (Galabiosylceramide)
|
Diosylceramides
|
Gal(a1-4)Gal(b1-1)Cer
|
Binding
|
|||
Shiga toxin
|
Gb2 (Galabiosylceramide)
|
Diosylceramides
|
Gal(a1-4)Gal(b1-1)Cer
|
Binding
|
|||
Shiga toxin
|
Gb2 (Galabiosylceramide)
|
Diosylceramides
|
Gal(a1-4)Gal(b1-1)Cer
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01