PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species ▲ | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Unknown
|
Heparin (N-desulfated, N-acetylated)
|
Glycosaminoglycans
|
Vero cells
|
Binding
|
|||
Unknown
|
Heparin (completely desulfated, N-acetylated)
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
|||
DbpA
|
Decorin
|
Proteoglycans
|
Extracellular matrix (ECM)
|
Binding
|
|||
"DbpA, DbpB, Bgp"
|
Decorin
|
Proteoglycans
|
Binding
|
||||
Unknown
|
Heparan sulfate
|
Glycosaminoglycans
|
C6 glioma cells, EA-Hy926 cells
|
Binding
|
|||
Unknown
|
Heparan sulfate
|
Glycosaminoglycans
|
C6 glioma cells, EA-Hy926 cells
|
Binding
|
|||
Unknown
|
Heparan sulfate
|
Glycosaminoglycans
|
C6 glioma cells, EA-Hy926 cells
|
Binding
|
|||
Unknown
|
Heparan sulfate
|
Glycosaminoglycans
|
C6 glioma cells, EA-Hy926 cells
|
Binding
|
|||
Unknown
|
Galactosylceramide (Galactocerebroside)
|
Monoglycosylceramides
|
Gal(b1-1)Cer
|
Binding
|
|||
Lectin-like proteins (adhesin)
|
Galactosylceramide (Galactocerebroside)
|
Monoglycosylceramides
|
Sputa of cystic fibrosis patients
|
Gal(b1-1)Cer
|
Binding
|
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Partly supported by NIH Common Fund Grant #1U01GM125267-01