Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source ▲ | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
Adhesins
|
Fetuin
|
Glycoproteins
|
HL-60 promyelocytic leukemia cell line
|
Binding
|
|||
|
Adhesins
|
N-Acetylgalactosamine
|
Monosaccharides
|
HL-60 promyelocytic leukemia cell line, Leukosialin (CD43)
|
GalNAc
|
Binding
|
||
|
Adhesins
|
Galactose
|
Monosaccharides
|
HL-60 promyelocytic leukemia cell line, Leukosialin (CD43)
|
Gal
|
Binding
|
||
|
Adhesins
|
Sialic acid
|
Monosaccharides
|
HL-60 promyelocytic leukemia cell line, Leukosialin (CD43)
|
Binding
|
|||
|
Unknown
|
N-acetyl-b-maltoheptaosylamine sulfate (SM)
|
Oligosaccharides
|
HeLa cells
|
Binding
|
|||
|
Unknown
|
Pentosan polysulfate (PP)
|
Polysaccharides
|
HeLa cells
|
Binding
|
|||
|
Unknown
|
Dextran sulfate
|
Polysaccharides
|
HeLa cells
|
Binding
|
|||
|
Unknown
|
NAC-heparin (non-anticoagulant heparin)
|
Glycosaminoglycans
|
HeLa cells
|
Binding
|
|||
|
B subunit
|
Gb3 (Globotriaosylceramide; Trihexosylceramide; Pk antigen (GSL); CTH)
|
Oligoglycosylceramides
|
HeLa cells, Rabbit jejunul mucosa
|
Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
Unknown
|
GM3(NeuGc)
|
Monosialoglycosphingolipids
|
Horse erythrocytes
|
NeuGc(a2-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
Displaying entries 221 - 230 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
