PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source ▲ | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Unknown
|
Alpha-1-acid glycoprotein (AGP)
|
Glycoproteins
|
Human
|
Not Binding
|
|||
Unknown
|
N-acetyl-b-maltoheptaosylamine sulfate (SM)
|
Oligosaccharides
|
Human T cells
|
Binding
|
|||
Unknown
|
Pentosan polysulfate (PP)
|
Polysaccharides
|
Human T cells
|
Binding
|
|||
Unknown
|
Dextran sulfate
|
Polysaccharides
|
Human T cells
|
Binding
|
|||
Unknown
|
NAC-heparin (non-anticoagulant heparin)
|
Glycosaminoglycans
|
Human T cells
|
Binding
|
|||
gp120
|
Sulfatide (CSE)
|
Sulfoglycosphingolipids
|
Human U373-MG glioma and SK-N-MC neuroblastoma cells, Human colon epithelial HT29 cells
|
HSO3(-3)Gal(b1-1)Cer
|
Binding
|
||
gp120
|
Galactosylceramide (Galactocerebroside)
|
Monoglycosylceramides
|
Human U373-MG glioma and SK-N-MC neuroblastoma cells, Human colon epithelial HT29 cells
|
Gal(b1-1)Cer
|
Binding
|
||
PT (subunit S3 of B oligomer)
|
Gangliosides
|
Sialoglycosphingolipids
|
Human alveolar macrophages
|
Binding
|
|||
Pertussis toxin
|
Gangliosides
|
Sialoglycosphingolipids
|
Human alveolar macrophages
|
Binding
|
|||
Neutrophil-activating proteins (150-kDa)
|
Sialyl Lewis a (SLea) (GSL)
|
Monosialoglycosphingolipids
|
Human bile bladder tumor
|
NeuAc(a2-3)Gal(b1-3)[Fuc(a1-4)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01