Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name ▼ | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
FimH
|
Uroplakins 1a and 1b containing a single N-linked carbohydrate of the high-mannose type
|
Glycoproteins
|
Binding
|
||||
|
Type 1-pili
|
Uroplakins 1a and 1b containing a single N-linked carbohydrate of the high-mannose type
|
Glycoproteins
|
Binding
|
||||
|
Unknown
|
Trisaccharides
|
Oligosaccharides
|
GlcNAc(b1-3)Gal(b1-4)Glc
|
Binding
|
|||
|
Type 4-pili
|
Thyroglobulin containing N-linked complex and hybrid (oligomannosidic) glycans
|
Glycoproteins
|
Bovine
|
Binding
|
|||
|
17-kDa HBP (Heparin-binding protein)
|
Thrombospondin (TSP)
|
Glycoproteins
|
Binding
|
||||
|
17-kDa HBP (Heparin-binding protein)
|
Thrombospondin (TSP)
|
Glycoproteins
|
Binding
|
||||
|
Unknown
|
Tetrasaccharides
|
Oligosaccharides
|
Respiratory tract
|
Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)GlcNAc
|
Binding
|
||
|
Unknown
|
Tetrasaccharides
|
Oligosaccharides
|
Respiratory tract
|
Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)GlcNAc
|
Binding
|
||
|
Unknown
|
Tetrasaccharides
|
Oligosaccharides
|
Respiratory tract
|
Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)GlcNAc
|
Binding
|
||
|
Unknown
|
Tetrasaccharides
|
Oligosaccharides
|
Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc
|
Binding
|
Displaying entries 231 - 240 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
