PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name ▲ | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Unknown
|
Blood group H antigen
|
Disaccharides
|
Saliva
|
Fuc(a1-2)Gal
|
Not Binding
|
||
Capsid proteins
|
Blood group H1 antigen
|
Oligosaccharides
|
Fuc(a1-2)Gal(b1-3)GlcNAc
|
Binding
|
|||
Unknown
|
Blood group H1 antigen (HSA)
|
Glycoproteins
|
Human serum albumin
|
Fuc(a1-2)Gal(b1-3)GlcNAc(b1-3)Gal(b1-4)Glc(c)-APD
|
Binding
|
||
BabA (blood group antigen binding adhesin)
|
Blood group H1 antigen (HSA)
|
Glycoproteins
|
Fuc(a1-2)Gal(b1-3)GlcNAc(b1-3)Gal(b1-4)Glc(c)-APD
|
Binding
|
|||
PA-IIL
|
Blood group Lewis b (Leb) antigen
|
Oligosaccharides
|
Binding
|
||||
Unknown
|
Blood group Lewis b (Leb) antigen
|
Oligosaccharides
|
Binding
|
||||
Unknown
|
Blood group Lewis b (Leb) antigen
|
Oligosaccharides
|
Binding
|
||||
BabA (blood group antigen binding adhesin)
|
Blood group Lewis b (Leb) antigen
|
Oligosaccharides
|
Binding
|
||||
BabA (blood group antigen binding adhesin)
|
Blood group Lewis b (Leb) antigen
|
Oligosaccharides
|
Binding
|
||||
Adhesins
|
Blood group Lewis b (Leb) antigen
|
Oligosaccharides
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01