PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding ▲ | PubMed ID |
---|---|---|---|---|---|---|---|
Unknown
|
GD1a
|
Disialoglycosphingolipids
|
NeuAc(a2-3)Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
S-fimbriae
|
alpha-sialyl-beta-2,3-galactose-containing glycolipids and glycoproteins
|
Glycoconjugates
|
NeuAc(a2-3)Gal(b
|
Binding
|
|||
S-fimbriae
|
unnamed ligand
|
Glycoconjugates
|
NeuAc(a2-3)Gal(b
|
Binding
|
|||
SfaS
|
unnamed ligand
|
Glycoconjugates
|
NeuAc(a2-3)Gal(b
|
Binding
|
|||
Unknown
|
Sia2-3Gal-containing receptors
|
Glycoconjugates
|
NeuAc(a2-3)Gal
|
Binding
|
|||
Ca2+-independent lectins
|
Hs antigen
|
Glycoproteins
|
NeuAc(a2-3)Gal(b1-4)Glc-HSA
|
Binding
|
|||
Unknown
|
Glycoproteins with α2,3 N-linked sialic acid
|
Glycoproteins
|
NeuAc(a2-3)Gal(b1-4)GlcNAc
|
Binding
|
|||
Unknown
|
Glycoproteins with terminal NeuAcα3Galβ4GlcNAc-sequences
|
Glycoproteins
|
NeuAc(a2-3)Gal(b1-4)GlcNAc
|
Binding
|
|||
Type-2 fimbrial lectins
|
GM1
|
Monosialoglycosphingolipids
|
Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
K88ac
|
GM3(NeuAc)
|
Monosialoglycosphingolipids
|
NeuAc(a2-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01