PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature ▼ | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Pertactin
|
Mannose oligosaccharides
|
Oligosaccharides
|
Man
|
Binding
|
|||
FimG/FimH
|
Mannose oligosaccharides
|
Oligosaccharides
|
Man
|
Binding
|
|||
Unknown
|
unnamed ligand
|
Oligosaccharides
|
Gal(b1-4)GlcNAc
|
Binding
|
|||
Unknown
|
unnamed ligand
|
Oligosaccharides
|
Gal(b1-4)GlcNAc
|
Binding
|
|||
Unknown
|
Trisaccharides
|
Oligosaccharides
|
GlcNAc(b1-3)Gal(b1-4)Glc
|
Binding
|
|||
Unknown
|
Tetrasaccharides
|
Oligosaccharides
|
Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc
|
Binding
|
|||
Unknown
|
unnamed ligand
|
Oligosaccharides
|
Gal(b1-3)GalNAc
|
Binding
|
|||
HMW1
|
Oligosaccharides rich in sialic acid
|
Oligosaccharides
|
Human epithelial cells
|
Binding
|
|||
HMW2
|
Oligosaccharides rich in sialic acid
|
Oligosaccharides
|
Human epithelial cells
|
Binding
|
|||
Hia
|
Oligosaccharides rich in sialic acid
|
Oligosaccharides
|
Human conjunctival cells (respiratory tract)
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01