Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID ▼ |
|---|---|---|---|---|---|---|---|
|
Unknown
|
O-linked alpha 2,3 neuraminic acid on glycophorin A (GPA)
|
Glycoproteins
|
Human erythrocytes
|
Binding
|
|||
|
SabA (sialic acid-binding adhesin)
|
Sialic acid
|
Monosaccharides
|
Human neutrophils
|
Binding
|
|||
|
Fibre proteins
|
HSA glycoconjugates
|
Glycoproteins
|
Human corneal epithelial(HEC) cells
|
Binding
|
|||
|
Unknown
|
Sialyl-3-Paragloboside (S-3-PG; α2,3-sialylparagloboside)
|
Monosialoglycosphingolipids
|
NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
|
Unknown
|
Sialyl Lewis x (SLex) antigen (d18:1,18:0)
|
Oligosaccharides
|
NeuAc(a2-3)Gal(b1-4)[Fuc(a1-3)]GlcNAc(b
|
Binding
|
|||
|
Unknown
|
Mono-N-propionylated S-3-PG (paragloboside)
|
Glycosphingolipids
|
Binding
|
||||
|
Unknown
|
Mono-de-N-acetylated S-3-PG (paragloboside)
|
Glycosphingolipids
|
Binding
|
||||
|
CTB-PsaA pentamers
|
GM1
|
Monosialoglycosphingolipids
|
Serum, Saliva, Nasal/bronchial wash samples
|
Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
Yeast cells and hyphae
|
Fibronectin
|
Glycoproteins
|
Extracellular matrix (ECM)
|
Binding
|
|||
|
Yeast cells and hyphae
|
Laminin
|
Glycoproteins
|
Extracellular matrix (ECM)
|
Binding
|
Displaying entries 251 - 260 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
