PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source ▲ | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Unknown
|
Heparin
|
Glycosaminoglycans
|
Human cervical cells
|
Binding
|
|||
Unknown
|
N-acetyl-b-maltoheptaosylamine sulfate (SM)
|
Oligosaccharides
|
Human cervical cells
|
Binding
|
|||
Unknown
|
Pentosan polysulfate (PP)
|
Polysaccharides
|
Human cervical cells
|
Binding
|
|||
Unknown
|
Dextran sulfate
|
Polysaccharides
|
Human cervical cells
|
Binding
|
|||
Unknown
|
NAC-heparin (non-anticoagulant heparin)
|
Glycosaminoglycans
|
Human cervical cells
|
Binding
|
|||
PT (subunits S2/S3 of B oligomer)
|
Glucosylceramide
|
Monoglycosylceramides
|
Human cilia of the respiratory epithelium
|
Glc(b1-1)Cer
|
Binding
|
||
Pertussis toxin
|
Glucosylceramide
|
Monoglycosylceramides
|
Human cilia of the respiratory epithelium
|
Glc(b1-1)Cer
|
Binding
|
||
Pertussis toxin
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Human cilia of the respiratory epithelium
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
PT (subunit S2 of B oligomer)
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Human cilia of the respiratory epithelium
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Unknown
|
Sulfo-lactosylceramide (SM3)
|
Sulfoglycosphingolipids
|
Human colon adenocarcinoma cells (WiDr )
|
HSO3(-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01