Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence ▼ | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
Residues 226 (glutamine) and 228 (glycine)
|
Sialic acid linked to α2,3Galβ1,3GalNAc
|
Oligosaccharides
|
Avian/equine isolates
|
NeuAc(a2-3)Gal(b1-3)GalNAc
|
Binding
|
||
|
S-fimbriae
|
unnamed ligand
|
Oligosaccharides
|
NeuAc(a2-3)Gal(b1-3)GalNAc
|
Binding
|
|||
|
S-fimbriae
|
unnamed ligand
|
Oligosaccharides
|
NeuAc(a2-3)Gal(b1-3)GalNAc
|
Binding
|
|||
|
S-fimbriae
|
unnamed ligand
|
Oligosaccharides
|
NeuAc(a2-3)Gal(b1-3)GalNAc
|
Binding
|
|||
|
S-fimbriae
|
unnamed ligand
|
Oligosaccharides
|
NeuAc(a2-3)Gal(b1-3)GalNAc
|
Binding
|
|||
|
S-fimbriae
|
unnamed ligand
|
Oligosaccharides
|
NeuAc(a2-3)Gal(b1-3)GalNAc
|
Binding
|
|||
|
Unknown
|
GM4
|
Monosialoglycosphingolipids
|
NeuAc(a2-3)Gal(b1-1)Cer
|
Not Binding
|
|||
|
S-fimbriae
|
alpha-sialyl-beta-2,3-galactose-containing glycolipids and glycoproteins
|
Glycoconjugates
|
NeuAc(a2-3)Gal(b
|
Binding
|
|||
|
S-fimbriae
|
unnamed ligand
|
Glycoconjugates
|
NeuAc(a2-3)Gal(b
|
Binding
|
|||
|
SfaS
|
unnamed ligand
|
Glycoconjugates
|
NeuAc(a2-3)Gal(b
|
Binding
|
Displaying entries 281 - 290 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
