GlyCosmos Portal

Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database	Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB)	June 1, 2016

Species	Pathogen Adherence Molecule ▲	Ligand Name	Ligand Feature	Target Source	Glycan Sequence	Binding	PubMed ID
Human immunodeficiency virus	Envelope glycoprotein gp120	Galactosyl sulfatide	Sulfoglycosphingolipids	Neural receptor	HSO3(-3)Gal(b1-1)Cer	Binding	1871126
Human immunodeficiency virus	Envelope glycoprotein gp120	Galactosylceramide (Galactocerebroside)	Monoglycosylceramides	Neural receptor	Gal(b1-1)Cer	Binding	1871126
Pseudomonas aeruginosa	Exoenzyme S	Asialo-GM2 (Gangliotriosylceramide; GgO3)	Oligoglycosylceramides		GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer	Binding	1679039
Pseudomonas aeruginosa	Exoenzyme S	Lactosylceramide (Lactocerebroside)	Diosylceramides		Gal(b1-4)Glc(b1-1)Cer	Binding	1679039
Pseudomonas aeruginosa	Exoenzyme S	Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)	Oligoglycosylceramides		Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer	Binding	1679039
Escherichia coli	F17	N-Acetylglucosamine	Monosaccharides	Urine (microvilli of the intestinal epithelium of ruminants)	GlcNAc	Binding	16564136
Escherichia coli	F1C	Lactosylceramide (t18:0-h16:0-h24:0)	Diosylceramides	Rabbit small intestine	Gal(b1-4)Glc(b1-1)Cer	Binding	11877427
Escherichia coli	F1C	Galactosylceramide (t18:0-h22:0-h24:0)	Monoglycosylceramides	Human kidney	Gal(b1-1)Cer	Binding	11877427
Escherichia coli	F1C	isoGb3 (Isoglobotriaosylceramide; iGb3)	Oligoglycosylceramides	Cat intestine	Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer	Binding	11877427
Escherichia coli	F1C	unnamed ligand	Saccharides	Urine	GalNAc(b1-4)Gal(b	Binding	16564136