PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID ▼ |
---|---|---|---|---|---|---|---|
PA-IL (51-kDa)
|
Galactose-alpha-1,4-galactose
|
Disaccharides
|
Gal(a1-4)Gal
|
Binding
|
|||
PA-IL (51-kDa)
|
N-Acetylgalactosamine
|
Monosaccharides
|
GalNAc
|
Binding
|
|||
PA-IL (51-kDa)
|
D-Galactose
|
Monosaccharides
|
Gal
|
Binding
|
|||
PA-IIL (47-kDa)
|
D-Mannose
|
Monosaccharides
|
Man
|
Binding
|
|||
PA-IIL (47-kDa)
|
L-Fucose
|
Monosaccharides
|
Fuc
|
Binding
|
|||
Type 4-pili
|
Asialo-GM2 (Gangliotriosylceramide; GgO3)
|
Oligoglycosylceramides
|
GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
PA-IL (51-kDa)
|
Phenyl-β-thiogalactoside
|
Saccharides
|
Binding
|
||||
Type 4-pili
|
Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)
|
Oligoglycosylceramides
|
Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
NeuC protein of K1 capsule (UDP GlcNAc 2-epimerase))
|
N-Acetylglucosamine
|
Monosaccharides
|
GlcNAc
|
Not Binding
|
|||
NeuC protein of K1 capsule (UDP GlcNAc 2-epimerase))
|
GlcNAc-6-P
|
Saccharides
|
Not Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01