PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID ▲ |
---|---|---|---|---|---|---|---|
Unknown
|
GM3(NeuAc)
|
Monosialoglycosphingolipids
|
NeuAc(a2-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
Unknown
|
GM3(NeuGc)
|
Monosialoglycosphingolipids
|
NeuGc(a2-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
Unknown
|
GT1b
|
Trisialoglycosphingolipids
|
NeuAc(a2-3)Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-8)NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
Unknown
|
Salivary glycoprotein
|
Glycoproteins
|
Human saliva
|
Binding
|
|||
Unknown
|
Bovine submaxillary mucin (BSM)
|
Glycoproteins
|
Binding
|
||||
Unknown
|
GM1
|
Monosialoglycosphingolipids
|
Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Unknown
|
GM2(NeuAc)
|
Monosialoglycosphingolipids
|
GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Unknown
|
Gangliosides
|
Sialoglycosphingolipids
|
Bovine brain
|
Binding
|
|||
Unknown
|
Alpha-1-acid glycoprotein (AGP)
|
Glycoproteins
|
Human
|
Not Binding
|
|||
Unknown
|
Glycoproteins
|
Glycoproteins
|
Rat serum
|
Binding
|
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01