GlyCosmos Portal

Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database	Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB)	June 1, 2016

Species	Pathogen Adherence Molecule	Ligand Name	Ligand Feature	Target Source ▼	Glycan Sequence	Binding	PubMed ID
Borrelia burgdorferi	Unknown	Heparan sulfate (fraction: HS-D)	Glycosaminoglycans	Vero cells		Not Binding	9826395
Borrelia burgdorferi	Unknown	Heparan sulfate (fraction: HS-D)	Glycosaminoglycans	Vero cells		Not Binding	9826395
Borrelia burgdorferi	Unknown	Heparan sulfate (fraction: HS-D)	Glycosaminoglycans	Vero cells		Not Binding	9826395
Escherichia coli	Shiga toxin (Stx2)	Gb3 (Globotriaosylceramide; Trihexosylceramide; Pk antigen (GSL); CTH)	Oligoglycosylceramides	Vero cells	Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer	Binding	15292153
Escherichia coli	Unknown	Gb3 (Globotriaosylceramide; Trihexosylceramide; Pk antigen (GSL); CTH)	Oligoglycosylceramides	Vero cells	Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer	Binding	15292153
Actinomyces viscosus	Unknown	SSEA-3 (GSL) (Galactosyl globoside; Gb5)	Oligoglycosylceramides	Vero cells	Gal(b1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer	Not Binding	2358461
Actinomyces naeslundii	Unknown	SSEA-3 (GSL) (Galactosyl globoside; Gb5)	Oligoglycosylceramides	Vero cells	Gal(b1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer	Binding	2358461
Borrelia burgdorferi	Unknown	Chondroitin 4-sulfate (C-4S)	Glycosaminoglycans	Vero cells		Not Binding	9826395
Borrelia burgdorferi	Unknown	Heparin (N-desulfated, N-acetylated)	Glycosaminoglycans	Vero cells		Binding	9826395
Borrelia burgdorferi	Unknown	Heparin (completely desulfated, N-acetylated)	Glycosaminoglycans	Vero cells		Not Binding	9826395