GlyCosmos Portal

Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database	Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB)	June 1, 2016

Species	Pathogen Adherence Molecule	Ligand Name	Ligand Feature	Target Source ▲	Glycan Sequence	Binding	PubMed ID
Bordetella pertussis	Pertussis toxin	Fetuin	Glycoproteins	Bovine		Binding	14532091
Bordetella pertussis	Unknown	Fetuin	Glycoproteins	Bovine		Binding	14532091
Influenza virus	Unknown	Gangliosides	Sialoglycosphingolipids	Bovine brain		Binding	1740131
Lactobacillus johnsonii	Unknown	unnamed ligand	Sialoglycosphingolipids	Bovine buttermilk	Gal(b1-4)GlcNAc(b1-6)[NeuAc(a2-6)Gal(b1-4)GlcNAc(b1-3)]Gal(b1-4)Glc(b1-1)Cer	Not Binding	11087711
Helicobacter pylori	Neutrophil-activating proteins (150-kDa)	unnamed ligand	Sialoglycosphingolipids	Bovine buttermilk	Gal(b1-4)GlcNAc(b1-6)[NeuAc(a2-6)Gal(b1-4)GlcNAc(b1-3)]Gal(b1-4)Glc(b1-1)Cer	Not Binding	9228091
Lactobacillus johnsonii	Unknown	unnamed ligand	Oligoglycosylceramides	Bovine buttermilk	Gal(b1-4)GlcNAc(b1-6)[Gal(b1-4)GlcNAc(b1-3)]Gal(b1-4)Glc(b1-1)Cer	Not Binding	11087711
Mycoplasma pneumoniae	Adhesins	Fetuin	Glycoproteins	Bovine erythrocytes		Binding	2470754
Helicobacter pylori	Neutrophil-activating proteins (150-kDa)	I-active Sialyl lactoisooctaosylceramide	Sialoglycosphingolipids	Bovine erythrocytes	Gal(a1-3)Gal(b1-4)GlcNAc(b1-6)[NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)]Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer	Not Binding	9228091
Escherichia coli	S-fimbriae (SfaA)	Seminolipid (Sulfogalactosylglycerolipid)	Glycolipids	Brain endothelial cells	Gal(3SO4)(b1-1)-alkylacylglycerol	Binding	8098039
Escherichia coli	S-fimbriae (SfaA)	Galactosylceramide (Galactocerebroside)	Monoglycosylceramides	Brain endothelial cells	Gal(b1-1)Cer	Binding	8098039