Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB) June 1, 2016
Species Pathogen Adherence Molecule Ligand Name Ligand Feature Target Source Glycan Sequence Binding PubMed ID ▼
Adhesins
Asialo-GM2 (Gangliotriosylceramide; GgO3)
Oligoglycosylceramides
Human epithelial cells (respiratory tract)
GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
Binding
Adhesins
unnamed ligand
Oligosaccharides
Human epithelial cells (respiratory tract)
Gal(b1-4)GlcNAc
Binding
Adhesins
GD1a
Disialoglycosphingolipids
Human epithelial cells (respiratory tract)
NeuAc(a2-3)Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
Not Binding
Adhesins
GM3(NeuAc)
Monosialoglycosphingolipids
Human epithelial cells (respiratory tract)
NeuAc(a2-3)Gal(b1-4)Glc(b1-1)Cer
Not Binding
Adhesins
GM1
Monosialoglycosphingolipids
Human epithelial cells (respiratory tract)
Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
Not Binding
Adhesins
GM2(NeuAc)
Monosialoglycosphingolipids
Human epithelial cells (respiratory tract)
GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
Not Binding
Adhesins
Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)
Oligoglycosylceramides
Human epithelial cells (respiratory tract)
Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
Binding
Pertussis toxin
Fetuin
Glycoproteins
Bovine
Binding
Unknown
Fetuin
Glycoproteins
Bovine
Binding
sigma 1 proteins
Sialic acid
Monosaccharides
Murine intestine, Murine spleen, Murine liver, Murine brain, Human cholangiocarcinoma cells
Binding
Displaying entries 291 - 300 of 1840 in total

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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01