Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source ▼ | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
Unknown
|
Glucosylceramide
|
Monoglycosylceramides
|
Intestinal tract
|
Glc(b1-1)Cer
|
Binding
|
||
|
Unknown
|
Gb4 (Globoside; Globotetraose; P antigen)
|
Oligoglycosylceramides
|
Intestinal tract
|
GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
|
Unknown
|
Gb5 (Forssman glycolipid)
|
Oligoglycosylceramides
|
Intestinal tract
|
GalNAc(a1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
|
Unknown
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Intestinal tract
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
Unknown
|
Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)
|
Oligoglycosylceramides
|
Intestinal tract
|
Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
Unknown
|
Gb3 (Globotriaosylceramide; Trihexosylceramide; Pk antigen (GSL); CTH)
|
Oligoglycosylceramides
|
Intestinal tract
|
Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
CS3 (coli surface 3)-fimbriae
|
GM1
|
Monosialoglycosphingolipids
|
Intestinal epithelium, Rabbit intestine
|
Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
CS3 (coli surface 3)-fimbriae
|
GM2(NeuAc)
|
Monosialoglycosphingolipids
|
Intestinal epithelium, Rabbit intestine
|
GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
CS3 (coli surface 3)-fimbriae
|
Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)
|
Oligoglycosylceramides
|
Intestinal epithelium, Rabbit intestine
|
Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
Botulinum neurotoxin (16S)
|
Lactose
|
Disaccharides
|
Intestinal epithelial cells (T84)
|
Gal(b1-4)Glc
|
Binding
|
Displaying entries 291 - 300 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
