Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name ▼ | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
Unknown
|
α-Gal on Fab of IgA(κ) MAb
|
Glycoproteins
|
Mouse
|
Gal
|
Binding
|
||
|
17-kDa HBP (Heparin-binding protein)
|
von Willebrand factor (VWF)
|
Glycoproteins
|
Binding
|
||||
|
17-kDa HBP (Heparin-binding protein)
|
von Willebrand factor (VWF)
|
Glycoproteins
|
Binding
|
||||
|
S-fimbriae
|
unnamed ligand
|
Oligosaccharides
|
Neural cell lines
|
NeuAc(a2-3)Gal(b1-3)GalNAc
|
Binding
|
||
|
Unknown
|
unnamed ligand
|
Oligosaccharides
|
Stomach
|
NeuAc(a2-3)Gal(b1-4)GlcNAc
|
Binding
|
||
|
K99
|
unnamed ligand
|
Oligosaccharides
|
Intestinal cells
|
NeuAc(a2-3)Gal(b1-4)Glc
|
Binding
|
||
|
Unknown
|
unnamed ligand
|
Oligosaccharides
|
Murine small plaque
|
NeuAc(a2-3)Gal(b1-3)[NeuAc(a2-6)]GalNAc
|
Binding
|
||
|
K1
|
unnamed ligand
|
Disaccharides
|
Endothelial cells
|
GlcNAc(b1-4)GlcNAc
|
Binding
|
||
|
Type-2 fimbrial lectins (130-kDa glycoprotein)
|
unnamed ligand
|
Oligosaccharides
|
Polymorphonuclear leukocytes (PMNs)
|
Gal(b1-3)GalNAc
|
Binding
|
||
|
PO
|
unnamed ligand
|
Oligosaccharides
|
human erythrocytes
|
Gal(a1-4)Gal
|
Binding
|
Displaying entries 31 - 40 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
