PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature ▲ | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Unknown
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Human lung, Human polymorphonuclear leukocytes, Human glioma brain cells
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
FHA (1141-1279)
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Ciliated epithelium of the respiratory tract
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Adhesins
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Phagocytes
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
PT (subunit S2 of B oligomer)
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Human cilia of the respiratory epithelium
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Lectin-like proteins (adhesin)
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Gonorrhoeae patients
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Unknown
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Dog small intestine
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Unknown
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Human erythrocytes
|
Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
Unknown
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Human colon adenocarcinoma cells (WiDr )
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Unknown
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Dog small intestine
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Unknown
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Human lung, Human polymorphonuclear leukocytes
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01