Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID ▼ |
|---|---|---|---|---|---|---|---|
|
Capsid VP1
|
GD1a-GT1b analog
|
Sialoglycosphingolipids
|
(broad range)
|
Binding
|
|||
|
hLT
|
Blood group A antigen analog
|
Oligosaccharides
|
Binding
|
||||
|
Unknown
|
Blood group H antigen
|
Disaccharides
|
Saliva
|
Fuc(a1-2)Gal
|
Binding
|
||
|
Unknown
|
Blood group A antigen (A-tri-HSA)
|
Glycoproteins
|
Saliva
|
GalNAc(a1-3)[Fuc(a1-2)]Gal(b)-O-APE
|
Binding
|
||
|
Unknown
|
Blood group B antigen (B-tri-HSA)
|
Glycoproteins
|
Gal(a1-3)[Fuc(a1-2)]Gal(b)-O-APE
|
Binding
|
|||
|
Unknown
|
Blood group A antigen (A-tri-HSA)
|
Glycoproteins
|
GalNAc(a1-3)[Fuc(a1-2)]Gal(b)-O-APE
|
Binding
|
|||
|
Unknown
|
Blood group Lewis b (Leb) antigen
|
Oligosaccharides
|
Binding
|
||||
|
Unknown
|
Blood group H antigen
|
Disaccharides
|
Saliva
|
Fuc(a1-2)Gal
|
Not Binding
|
||
|
Unknown
|
Blood group B antigen
|
Oligosaccharides
|
Saliva
|
Gal(a1-3)[Fuc(a1-2)]Gal
|
Binding
|
||
|
Unknown
|
Blood group A antigen
|
Oligosaccharides
|
Saliva
|
GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GlcNAc
|
Binding
|
Displaying entries 41 - 50 of 1840 in total
To see the latest features, please visit our beta site.
International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
