Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB) June 1, 2016
Species Pathogen Adherence Molecule Ligand Name Ligand Feature Target Source Glycan Sequence Binding PubMed ID ▼
Unknown
Blood group A antigen
Oligosaccharides
Saliva
GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GlcNAc
Not Binding
Unknown
Blood group B antigen
Oligosaccharides
Saliva
Gal(a1-3)[Fuc(a1-2)]Gal
Not Binding
Unknown
Blood group A antigen (A-tri-HSA)
Glycoproteins
GalNAc(a1-3)[Fuc(a1-2)]Gal(b)-O-APE
Not Binding
Unknown
Blood group B antigen (B-tri-HSA)
Glycoproteins
Gal(a1-3)[Fuc(a1-2)]Gal(b)-O-APE
Not Binding
Unknown
Lewis a (Lea) (GSL)
Glycosphingolipids
Gal(b1-3)[Fuc(a1-4)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
Not Binding
Unknown
Lewis a (Lea) (GSL)
Glycosphingolipids
Gal(b1-3)[Fuc(a1-4)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
Binding
Unknown
Blood group H antigen
Disaccharides
Fuc(a1-2)Gal
Binding
Unknown
Blood group B antigen
Oligosaccharides
Gal(a1-3)[Fuc(a1-2)]Gal
Binding
Unknown
Blood group A antigen
Oligosaccharides
GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GlcNAc
Binding
PclA (pneumococcal collagen-like protein A)
unknown carbohydrate ligand
Saccharides
Detroit 562/A549 cell lines
Binding
Displaying entries 51 - 60 of 1840 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01