Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB) June 1, 2016
Species Pathogen Adherence Molecule Ligand Name Ligand Feature Target Source ▲ Glycan Sequence Binding PubMed ID
Unknown
Heparan sulfate
Glycosaminoglycans
C6 glioma cells, EA-Hy926 cells
Binding
Unknown
Heparan sulfate
Glycosaminoglycans
C6 glioma cells, EA-Hy926 cells
Binding
Unknown
Heparan sulfate
Glycosaminoglycans
C6 glioma cells, EA-Hy926 cells
Binding
Unknown
Heparan sulfate
Glycosaminoglycans
C6 glioma cells, EA-Hy926 cells
Binding
Unknown
Heparan sulfate
Glycosaminoglycans
C6 glioma cells, EA-Hy926 cells
Binding
Unknown
Heparan sulfate
Glycosaminoglycans
C6 glioma cells, EA-Hy926 cells
Binding
F1C
isoGb3 (Isoglobotriaosylceramide; iGb3)
Oligoglycosylceramides
Cat intestine
Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer
Binding
Capsid protein VP1
Sialylated oligosaccharides
Oligosaccharides
Cell surface
NeuAc(a2-3)Gal(b1-3)GalNAc
Binding
FHA (filamentous hemagglutinin)
Sulfatide (CSE)
Sulfoglycosphingolipids
Cell surface
HSO3(-3)Gal(b1-1)Cer
Binding
Capsid protein VP1
Sialylated oligosaccharides
Oligosaccharides
Cell surface
NeuAc(a2-3)Gal(b1-3)[NeuAc(a2-6)]GalNAc
Binding
Displaying entries 51 - 60 of 1840 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01