GlyCosmos Portal

Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database	Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB)	June 1, 2016

Species ▲	Pathogen Adherence Molecule	Ligand Name	Ligand Feature	Target Source	Glycan Sequence	Binding	PubMed ID
Actinomyces naeslundii	Type 2-fimbriae	β-linked galactosamine	Saccharides	Buccae	GalNAc(b 2:2	Not Binding	9712794
Actinomyces naeslundii	Unknown	unnamed ligand	Disaccharides		GalNAc(b1-3)Gal	Binding	12628483
Actinomyces naeslundii	Unknown	Lactotriaosylceramide (Lc3)	Oligoglycosylceramides		GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer	Binding	2358461
Actinomyces naeslundii	Type 2-fimbriae	unnamed ligand	Oligosaccharides		Gal(b1-4)Glc	Binding	2885220
Actinomyces naeslundii	Unknown	Lewis x (Lex) (GSL)	Oligoglycosylceramides	Dog small intestine	Gal(b1-4)[Fuc(a1-3)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer	Not Binding	2358461
Actinomyces naeslundii	Unknown	unnamed ligand	Oligoglycosylceramides	Dog small intestine	GalNAc(a1-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer	Not Binding	2358461
Actinomyces naeslundii	Unknown	unnamed ligand	Sialoglycosphingolipids	Frog brain	Gal(b1-3)[NeuAc(a2-6)]GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer	Binding	2358461
Actinomyces naeslundii	Unknown	Lactosylceramide (Lactocerebroside)	Diosylceramides	Dog small intestine	Gal(b1-4)Glc(b1-1)Cer	Binding	2358461
Actinomyces naeslundii	Unknown	Lactosylceramide (Lactocerebroside)	Diosylceramides	Human erythrocytes	Gal(b1-4)Glc(b1-1)Cer	Not Binding	2358461
Actinomyces naeslundii	Unknown	Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)	Oligoglycosylceramides	Mouse small intestine	Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer	Binding	2358461