PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule ▼ | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Unknown
|
Sulfatide (CSE)
|
Sulfoglycosphingolipids
|
Intestinal tract
|
HSO3(-3)Gal(b1-1)Cer
|
Binding
|
||
Unknown
|
GT1b
|
Trisialoglycosphingolipids
|
Brain membrane
|
NeuAc(a2-3)Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-8)NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Unknown
|
Blood group H antigen
|
Disaccharides
|
Saliva
|
Fuc(a1-2)Gal
|
Binding
|
||
Unknown
|
N-acetyllactosamine (LacNAc)
|
Disaccharides
|
Genitalium
|
Gal(b1-4)GlcNAc
|
Binding
|
||
Unknown
|
Lactose
|
Disaccharides
|
Intestine-407 cells
|
Gal(b1-4)Glc
|
Binding
|
||
Unknown
|
N-acetyllactosamine (LacNAc)
|
Disaccharides
|
Intestine-407 cells
|
Gal(b1-4)GlcNAc
|
Binding
|
||
Unknown
|
Blood group B antigen (B-tri-HSA)
|
Glycoproteins
|
Human serum albumin
|
Gal(a1-3)[Fuc(a1-2)]Gal(b)-O-APE
|
Binding
|
||
Unknown
|
Blood group A antigen (A-tri-HSA)
|
Glycoproteins
|
Human serum albumin
|
GalNAc(a1-3)[Fuc(a1-2)]Gal(b)-O-APE
|
Binding
|
||
Unknown
|
Blood group A antigen (A-tri-HSA)
|
Glycoproteins
|
Saliva
|
GalNAc(a1-3)[Fuc(a1-2)]Gal(b)-O-APE
|
Binding
|
||
Unknown
|
α-Gal on Fab of IgA(κ) MAb
|
Glycoproteins
|
Mouse
|
Gal
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01