Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule ▲ | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
36-kDa proteins
|
Asialo-GM2 (Gangliotriosylceramide; GgO3)
|
Oligoglycosylceramides
|
Mucos membranes of the genitourinary tract/rectum/oropharynx/conjunctiva
|
GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
36-kDa proteins
|
Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)
|
Oligoglycosylceramides
|
Mucos membranes of the genitourinary tract/rectum/oropharynx/conjunctiva
|
Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
36-kDa proteins
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
|
36-kDa proteins
|
Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)
|
Oligoglycosylceramides
|
Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
|
5 bacterial surface proteins (50 to 90-kDa)
|
Phosphatidylethanolamine (PE)
|
Non-glycosylated Lipids
|
HEp-2 cells
|
Binding
|
|||
|
52-kDa recombinant fusion proteins
|
N-Acetylgalactosamine
|
Monosaccharides
|
GalNAc
|
Binding
|
|||
|
52-kDa recombinant fusion proteins
|
Galactose
|
Monosaccharides
|
Gal
|
Binding
|
|||
|
66-kDa subunit
|
Asialo-GM2 (Gangliotriosylceramide; GgO3)
|
Oligoglycosylceramides
|
Human buccal epihelial cells (BECs)
|
GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
66-kDa subunit
|
Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)
|
Oligoglycosylceramides
|
Human buccal epihelial cells (BECs)
|
Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
68-kDa proteins
|
N-Acetylglucosamine
|
Monosaccharides
|
Bronchial lavages of sheep with pneumonic pasteurelosis
|
GlcNAc
|
Binding
|
Displaying entries 61 - 70 of 1840 in total
To see the latest features, please visit our beta site.
International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
