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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Source | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name ▼ | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
| Clostridium difficile | C-terminal domain of toxin A molecules | unnamed ligand | Oligosaccharides | Human colonic cells | Gal(a1-3)Gal(b1-4)GlcNAc | Binding | 12507507 |
| Streptococcus suis | PN | unnamed ligand | Oligosaccharides | human erythrocytes | Gal(a1-4)Gal | Binding | 7499414 |
| Legionella pneumophila | Adhesins | unnamed ligand | Oligosaccharides | Human epithelial cells (respiratory tract) | Gal(b1-4)GlcNAc | Binding | 14687561 |
| Campylobacter jejuni | Unknown | unnamed ligand | Oligosaccharides | Intestinal cells | Fuc(a1-2)Gal(b1-4)GlcNAc | Binding | 16564136 |
| Pseudomonas aeruginosa | Unknown | unnamed ligand | Oligosaccharides | Respiratory tract | Gal(b1-3)GlcNAc(b1-3)Gal(b1-4)Glc | Binding | 16564136 |
| Streptococcus pneumoniae | Unknown | unnamed ligand | Oligosaccharides | Chinchilla tubotympanum | Gal(b1-4)GlcNAc(b1-3)Gal(b | Binding | 1298868 |
| Streptococcus suis | Unknown | unnamed ligand | Oligosaccharides | Respiratory tract | Gal(a1-4)Gal(b1-4)Glc | Binding | 16564136 |
| Actinomyces naeslundii | Unknown | unnamed ligand | Polyglycosylceramides | Rat small intestine | GalNAc(b1-3)[Gal(a1-3)]nGal(a1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 2358461 |
| Escherichia coli | F1C | unnamed ligand | Saccharides | Urine | GalNAc(b1-4)Gal(b | Binding | 16564136 |
| Escherichia coli | Unknown | unnamed ligand | Glycosphingolipids | Fuc(a1-2)Gal(b1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 2435422 | |
| Escherichia coli | P-fimbriae | unnamed ligand | Oligoglycosylceramides | Gal(b1-4)GlcNAc(b1-6)[Gal(b1-3)]GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 7721812 | |
| Escherichia coli | Unknown | unnamed ligand | Oligoglycosylceramides | GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 2435422 | |
| Escherichia coli | FimD | unnamed ligand | Oligosaccharides | Gal(a1-4)Gal | Binding | 12628483 | |
| Fusobacterium nucleatum | Lectin-like proteins (adhesin) | unnamed ligand | Oligosaccharides | Gal(b1-4)GlcNAc | Binding | 1894623 | |
| Fusobacterium nucleatum | Lectin-like proteins (adhesin) | unnamed ligand | Oligosaccharides | Gal(b1-3)GalNAc | Binding | 1894623 | |
| Escherichia coli | P-fimbriae | unnamed ligand | Oligosaccharides | Gal(a1-4)Gal | Binding | 12628483 | |
| Escherichia coli | P-fimbriae | unnamed ligand | Oligosaccharides | Gal(a1-4)Gal(b | Binding | 2885220 | |
| Streptococcus suis | 18-kDa proteins | unnamed ligand | Oligosaccharides | Gal(a1-4)Gal | Binding | 8751914 | |
| Entamoeba histolytica | Unknown | unnamed ligand | Oligosaccharides | Gal(b1-4)GlcNAc | Binding | 12628483 | |
| Staphylococcus saprophyticus | Unknown | unnamed ligand | Oligosaccharides | Gal(b1-4)GlcNAc | Binding | 2885220 | |
| Actinomyces naeslundii | Unknown | unnamed ligand | Oligosaccharides | Gal(b1-3)GalNAc | Binding | 12628483 | |
| Streptococcus pneumoniae | Unknown | unnamed ligand | Saccharides | GlcNAc(b1-3)Gal | Binding | 2885220 | |
| Helicobacter pylori | Neutrophil-activating proteins (150-kDa) | unnamed ligand | Sialoglycosphingolipids | Human erythrocytes | NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer | Binding | 9228091 |
| Actinomyces naeslundii | Unknown | unnamed ligand | Sialoglycosphingolipids | Frog brain | Gal(b1-3)[NeuAc(a2-6)]GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 2358461 |
| Escherichia coli | Unknown | unnamed ligand | Sialoglycosphingolipids | NeuAc(a2-6)[NeuAc(a2-3)]Gal(b1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 2435422 |
