GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 251 - 275 of 557 in total
Pathway Name Protein Name ▼ UniProt ID Gene Symbol Organism GlyTouCan ID
Lactose synthesis
  • B4GALT1
  • GALT
  • GGTB2
  • GLUT1
  • SLC2A1
Bos taurus (cattle)
Interaction With Cumulus Cells And The Zona Pellucida
  • ADAM2
  • B4GALT1
  • GALT
  • GGTB2
  • LOC509761
  • OVGP1
  • ZP2
  • ZP3
  • ZP4
  • ZPB
Bos taurus (cattle)
Glycosphingolipid biosynthesis
  • A4GALT
  • B3GALT4
  • B3GNT5
  • B4GALNT1
  • B4GALT5
  • B4GALT6
  • CERK
  • FUT1
  • FUT2
  • GALGT
  • ST3GAL2
  • ST3GAL3
  • ST3GAL5
  • ST6GALNAC5
  • ST6GALNAC6
  • ST8SIA5
  • UGCG
  • UGT8
  • siat4B
Bos taurus (cattle)
O-linked glycosylation of mucins
  • B3GNT2
  • B3GNT4
  • B3GNT5
  • B3GNT6
  • B3GNT8
  • B3GNT9
  • B3GNTL1
  • B4GALT5
  • B4GALT6
  • C1GALT1
  • C1GALT1C1
  • CHST4
  • GALNT1
  • GALNT10
  • GALNT11
  • GALNT12
  • GALNT13
  • GALNT14
  • GALNT15
  • GALNT16
  • GALNT17
  • GALNT18
  • GALNT2
  • GALNT3
  • GALNT5
  • GALNT6
  • GALNT7
  • GALNT8
  • GALNTL1
  • GALNTL5
  • GCNT1
  • GCNT3
  • GCNT4
  • LOC789503
  • MUC1
  • MUC15
  • MUC2
  • MUC20
Bos taurus (cattle)
Basigin interactions
  • ATP1B1
  • ATP1B2
  • ATP1B3
  • BSG
  • CAV1
  • ITGA3
  • ITGA6
  • ITGB1
  • LOC112441463
  • MAG
  • PPIA
  • PPIL2
  • SLC16A1
  • SLC16A3
  • SLC16A8
  • SLC3A2
  • SLC7A10
  • SLC7A11
  • SLC7A5
  • SLC7A6
  • SLC7A7
  • SLC7A8
  • SLC7A9
  • SPN
Bos taurus (cattle)
Integrin cell surface interactions
  • BSG
  • CD18
  • CD44
  • CD47
  • CDH1
  • COL13A1
  • COL16A1
  • COL18A1
  • COL4A1
  • COL4A3
  • COMP
  • F11R
  • FBN1
  • FN1
  • IBSP
  • ICAM1
  • ICAM3
  • ICAM5
  • ITGA1
  • ITGA10
  • ITGA11
  • ITGA2
  • ITGA2B
  • ITGA3
  • ITGA4
  • ITGA6
  • ITGA9
  • ITGAL
  • ITGAM
  • ITGAV
  • ITGAX
  • ITGB1
  • ITGB2
  • ITGB3
  • ITGB5
  • ITGB6
  • ITGB7
  • ITGB8
  • JAM1
  • JAM2
  • LDC
  • LOC534578
  • LOC616254
  • LUM
  • P2RX5
  • PECAM1
  • SPP1
  • THBS1
  • TNC
  • VCAM1
  • VTN
Bos taurus (cattle)
Neurexins and neuroligins
  • CASK
  • DLG3
  • DLG4
  • DLGAP1
  • DLGAP3
  • DLGAP4
  • E41P
  • EPB41
  • EPB41L1
  • EPB41L2
  • EPB41L3
  • EPB41L5
  • GRM1
  • GRM5
  • HOMER1
  • HOMER2
  • HOMER3
  • LRRTM1
  • LRRTM2
  • LRRTM3
  • LRRTM4
  • NLGN1
  • NLGN2
  • NLGN3
  • NLGN4X
  • NRXN3
  • SHANK1
  • SHANK3
  • SORBS2
Bos taurus (cattle)
Antimicrobial peptides
  • ARHGEF40
  • BPI
  • BPIFA1
  • BPIFA2A
  • BPIFB1
  • BPIFB2
  • BPIFB4
  • BPIFB6
  • CATHL4
  • CLU
  • ELANE
  • LEAP2
  • LOC104968634
  • LOC112441508
  • LOC509956
  • LOC783267
  • LTF
  • LYZ1
  • LYZ2
  • LYZ3
  • PGLYRP
  • PGLYRP1
  • PGLYRP2
  • PGLYRP3
  • PGLYRP4
  • PGRP
  • PI3
  • PLA2G2A
  • PLUNC
  • PRSS2
  • PRTN3
  • PTP
  • RK6B
  • RNASE2
  • RNASE6
  • RNS6
Bos taurus (cattle)
Translocation of ZAP-70 to Immunological synapse
  • BLA-DQB
  • BOLA-DQA1
  • BOLA-DQA2
  • BOLA-DQA5
  • BOLA-DRA
  • BOLA-DRB2
  • BOLA-DRB3
  • BOLA-DYA
  • BOLA-DYB
  • BoLA-DIB
  • BoLA-DRA
  • BoLA-DYB
  • CD247
  • CD3D
  • CD3E
  • CD3G
  • CD4
  • DYB
  • HLA-DRA
  • LCK
  • LOC100848815
  • PTPN22
  • TRAV29-1
  • ZAP70
Bos taurus (cattle)
PD-1 signaling
  • BLA-DQB
  • BOLA-DQA1
  • BOLA-DQA2
  • BOLA-DQA5
  • BOLA-DRA
  • BOLA-DRB2
  • BOLA-DRB3
  • BOLA-DYA
  • BOLA-DYB
  • BoLA-DIB
  • BoLA-DRA
  • BoLA-DYB
  • CD247
  • CD274
  • CD3D
  • CD3E
  • CD3G
  • CD4
  • CSK
  • DYB
  • HLA-DRA
  • LCK
  • LOC100848815
  • PD-L1
  • PDCD1LG2
  • PTPN11
  • PTPN6
  • TRAV29-1
Bos taurus (cattle)
Phosphorylation of CD3 and TCR zeta chains
  • BLA-DQB
  • BOLA-DQA1
  • BOLA-DQA2
  • BOLA-DQA5
  • BOLA-DRA
  • BOLA-DRB2
  • BOLA-DRB3
  • BOLA-DYA
  • BOLA-DYB
  • BoLA-DIB
  • BoLA-DRA
  • BoLA-DYB
  • CD247
  • CD3D
  • CD3E
  • CD3G
  • CD4
  • CSK
  • DYB
  • HLA-DRA
  • LCK
  • LOC100848815
  • PAG1
  • PTPN22
  • PTPRC
  • PTPRJ
  • TRAV29-1
Bos taurus (cattle)
Downregulation of TGF-beta receptor signaling
  • BAMBI
  • MTMR4
  • RPS27A
  • SMAD2
  • SMAD3
  • SMAD7
  • SMURF2
  • STRAP
  • STUB1
  • TGFB1
  • TGFBR1
  • TGFBR2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
Myogenesis
  • ABL1
  • BNIP2
  • BOC
  • CDC42
  • CDH15
  • CDH2
  • CDH4
  • CDON
  • CTNNA1
  • CTNNB1
  • MAPK11
  • MAPK14
  • MEF2B
  • MEF2C
  • MRF4
  • MYF5
  • MYF6
  • MYOD1
  • MYOG
  • SPAG9
  • TCF12
  • TCF3
  • TCF4
Bos taurus (cattle)
Apoptotic execution phase
  • BCAP31
  • CASP8
  • DNM1L
  • STK24
Bos taurus (cattle)
CD22 mediated BCR regulation
  • CD22
  • CD79A
  • CD79B
  • IGA
  • LYN
  • MB-1
  • PTPN6
Bos taurus (cattle)
TNF receptor superfamily (TNFSF) members mediating non-canonical NF-kB pathway
  • BIRC2
  • BIRC3
  • CD40
  • CD40LG
  • LTA
  • LTB
  • LTBR
  • MAP3K14
  • NCR3
  • TNFB
  • TNFRSF11A
  • TNFRSF12A
  • TNFRSF13C
  • TNFRSF5
  • TNFSF1
  • TNFSF11
  • TNFSF12
  • TNFSF13B
  • TNFSF14
  • TNLG1D
  • TNLG7A
  • TRAF2
  • TRAF3
Bos taurus (cattle)
TCF dependent signaling in response to WNT
  • AXIN1
  • AXIN2
  • CTNNB1
  • RNF146B
  • RPS27A
  • TNKS
  • TNKS2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • USP34
  • WNT1
  • WNT3
  • WNT3A
  • WNT5A
Bos taurus (cattle)
Receptor Mediated Mitophagy
  • ATG12
  • ATG5
  • CK2A1
  • CK2N
  • CSNK2A1
  • CSNK2A2
  • CSNK2B
  • FUNDC1
  • MAP1ALC3
  • MAP1LC3
  • MAP1LC3A
  • MAP1LC3B
  • PGAM5
  • SRC
  • ULK1
Bos taurus (cattle)
N-glycan trimming in the ER and Calnexin/Calreticulin cycle
  • AMFR
  • DERL1
  • ENGASE
  • NGLY1
  • RAD23B
  • RPS27A
  • SAKS1
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • UBXN1
  • VCP
Bos taurus (cattle)
Chemokine receptors bind chemokines
  • ACKR2
  • ACKR3
  • ACKR4
  • CCL1
  • CCL11
  • CCL19
  • CCL2
  • CCL20
  • CCL21
  • CCL22
  • CCL25
  • CCL27
  • CCL28
  • CCL4
  • CCL5
  • CCR1
  • CCR10
  • CCR11
  • CCR3
  • CCR4
  • CCR5
  • CCR6
  • CCR8
  • CCR9
  • CCRL1
  • CCRL2
  • CMKBR5
  • CX3CR1
  • CXCL10
  • CXCL11
  • CXCL12
  • CXCL13
  • CXCL16
  • CXCL3
  • CXCL6
  • CXCL8
  • CXCL9
  • CXCR1
  • CXCR2
  • CXCR3
  • CXCR4
  • CXCR5
  • CXCR6
  • CXCR7
  • GCP2
  • IL8
  • LOC100297044
  • LOC525415
  • LOC616364
  • MIP3A
  • PPBP
  • SCY4A
  • SCYA2
  • SCYA20
  • SCYA5
  • SCYB6
  • XCL1
  • XCL2
  • XCR1
Bos taurus (cattle)
Physiological factors
  • CES1
  • CORIN
  • MME
  • NPPA
  • NPPC
  • NPR1
  • NPR2
Bos taurus (cattle)
RAF-independent MAPK1/3 activation
  • DUSP1
  • DUSP10
  • DUSP16
  • DUSP4
  • DUSP5
  • DUSP6
  • DUSP7
  • DUSP8
  • DUSP9
  • ERK2
  • MAPK1
  • MAPK3
  • PEA15
  • PRKM1
Bos taurus (cattle)
Glutamate and glutamine metabolism
  • ALDH18A1
  • FAM80B
  • GLS
  • GLS2
  • GLUD1
  • GLUL
  • GOT2
  • OAT
  • PYCR1
  • PYCR2
  • PYCR3
  • PYCRL
  • RIMKLA
  • RIMKLB
Bos taurus (cattle)
Malate-aspartate shuttle
  • GC1
  • GOT1
  • GOT2
  • MDH1
  • MDH2
  • SLC20A4
  • SLC25A11
  • SLC25A12
  • SLC25A22
Bos taurus (cattle)
Asparagine N-linked glycosylation
  • ASGR1
  • ASGR2
  • B4GALNT2
  • UMOD
Bos taurus (cattle)

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Last updated: August 19, 2024