GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 401 - 425 of 557 in total
Pathway Name Protein Name ▲ UniProt ID Gene Symbol Organism GlyTouCan ID
ADP signalling through P2Y purinoceptor 1
  • CPLA2
  • GNA11
  • GNA14
  • GNA15
  • GNAQ
  • GNB1
  • GNB2
  • GNB3
  • GNB4
  • GNB5
  • GNG10
  • GNG11
  • GNG12
  • GNG13
  • GNG2
  • GNG3
  • GNG4
  • GNG5
  • GNG7
  • GNG8
  • GNGT1
  • GNGT12
  • GNGT2
  • GNGT3
  • GNGT5
  • GNGT7
  • GNGT8
  • MAPK14
  • P2RY1
  • PLA2G4
  • PLA2G4A
  • SRC
Bos taurus (cattle)
Acyl chain remodelling of PG
  • CPLA2
  • CRLS1
  • LOC613966
  • LPCAT1
  • LPCAT4
  • LPGAT1
  • PLA2G12A
  • PLA2G1B
  • PLA2G2A
  • PLA2G2D1
  • PLA2G2E
  • PLA2G3
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4F
  • PLA2R1
Bos taurus (cattle)
Acyl chain remodelling of PC
  • CPLA2
  • LOC613966
  • LPCAT1
  • LPCAT2
  • LPCAT3
  • LPCAT4
  • MBOAT2
  • PLA2G12A
  • PLA2G16
  • PLA2G1B
  • PLA2G2A
  • PLA2G2D1
  • PLA2G2E
  • PLA2G3
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4E
  • PLA2G4F
  • PLA2G6
  • PLA2R1
  • PLBD1
  • PNPLA8
  • TMEM86B
Bos taurus (cattle)
Acyl chain remodelling of PS
  • CPLA2
  • LOC613966
  • LPCAT3
  • LPCAT4
  • MBOAT1
  • OSBPL10
  • OSBPL5
  • OSBPL8
  • PLA2G12A
  • PLA2G16
  • PLA2G1B
  • PLA2G2A
  • PLA2G2D1
  • PLA2G2E
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4E
  • PLA2G4F
  • PLA2R1
Bos taurus (cattle)
Acyl chain remodelling of PI
  • CPLA2
  • LENG4
  • LOC613966
  • MBOAT7
  • OACT7
  • PLA2G12A
  • PLA2G16
  • PLA2G1B
  • PLA2G2A
  • PLA2G2D1
  • PLA2G2E
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4E
  • PLA2G4F
  • PLA2R1
  • PLBD1
Bos taurus (cattle)
Hydrolysis of LPC
  • CPLA2
  • LYPLA3
  • PLA2G15
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4E
  • PLA2G4F
  • PLBD1
Bos taurus (cattle)
Dopamine receptors
  • D1AR
  • DRD1
  • DRD2
  • DRD3
  • DRD5
Bos taurus (cattle)
Serine biosynthesis
  • PHGDH
  • PSAT1
  • PSPH
  • SERINC1
  • SERINC2
  • SERINC3
  • SERINC4
  • SERINC5
  • SRR
  • TDE2
  • TDE2L
Bos taurus (cattle)
Transcriptional regulation by the AP-2 (TFAP2) family of transcription factors
  • DEK
  • TFAP2A
Bos taurus (cattle)
Keratinization
  • DSC1
  • DSC2
  • DSC3
  • DSG1
  • DSG2
  • DSG3
  • DSG4
  • DSP
  • JUP
  • KRT1
  • KRT10
  • KRT13
  • KRT14
  • KRT15
  • KRT16
  • KRT17
  • KRT18
  • KRT19
  • KRT2
  • KRT20
  • KRT23
  • KRT24
  • KRT25
  • KRT26
  • KRT27
  • KRT28
  • KRT3
  • KRT31
  • KRT32
  • KRT33A
  • KRT33B
  • KRT35
  • KRT36
  • KRT37
  • KRT39
  • KRT4
  • KRT40
  • KRT5
  • KRT6B
  • KRT7
  • KRT72
  • KRT73
  • KRT74
  • KRT75
  • KRT77
  • KRT78
  • KRT79
  • KRT8
  • KRT80
  • KRT81
  • KRT82
  • KRT83
  • KRT84
  • KRT85
  • KRT86
  • KRT9
  • KRTAP1-1
  • KRTAP10-8
  • KRTAP11-1
  • KRTAP12-2
  • KRTAP19-5
  • KRTAP24-1
  • KRTAP27-1
  • KRTAP3-1
  • KRTAP3-3
  • KRTAP4-7
  • KRTAP8-1
  • LOC100294937
  • LOC100300014
  • LOC101902114
  • LOC112442669
  • LOC112446672
  • LOC112446673
  • LOC112446984
  • LOC112448008
  • LOC507184
  • LOC616413
  • LOC618359
  • LOC618938
  • LOC787051
  • LOC787225
  • LOC787600
  • PKP1
  • PKP4
Bos taurus (cattle)
The retinoid cycle in cones (daylight vision)
  • BCP
  • CRALBP
  • DHRS3
  • OPN1LW
  • OPN1SW
  • RBP3
  • RCP
  • RLBP1
Bos taurus (cattle)
Effects of PIP2 hydrolysis
  • DGKA
  • DGKB
  • DGKD
  • DGKE
  • DGKI
  • DGKK
  • DGKQ
  • DGKZ
  • ITPR1
  • ITPR2
  • ITPR3
  • PRKCD
  • PRKCH
  • PRKCQ
  • TRP6
  • TRPC3
  • TRPC6
  • TRPC7
Bos taurus (cattle)
Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)
  • CD26
  • DPP4
  • FFAR4
  • GCG
  • GNAT3
  • GNB1
  • GNB3
  • GNG13
  • GPR119
  • GPR120
  • GRP
  • LEP
  • ob
Bos taurus (cattle)
Synthesis, secretion, and inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP)
  • CD26
  • DPP4
  • GIP
  • GPR119
Bos taurus (cattle)
Synaptic adhesion-like molecules
  • DLG1
  • DLG3
  • DLG4
  • FLOT1
  • FLOT2
  • GRIA1
  • GRIA3
  • LRFN1
  • LRFN2
  • LRFN3
  • LRFN4
  • PTPRD
  • PTPRF
  • PTPRS
  • SALM4
Bos taurus (cattle)
PCP/CE pathway
  • ARHA
  • DAAM1
  • DVL1
  • DVL2
  • DVL3
  • FZD1
  • FZD3
  • FZD6
  • FZD7
  • PFN1
  • RAC2
  • RAC3
  • RHO12
  • RHOA
  • WNT1
  • WNT11
  • WNT4
  • WNT5A
Bos taurus (cattle)
Attenuation phase
  • CREBBP
  • DNAJB1
  • EP300
  • FKBP4
  • HSBP1
  • HSC70
  • HSF1
  • HSP70-1
  • HSP90A
  • HSP90AA1
  • HSP90AB1
  • HSPA1A
  • HSPA1L
  • HSPA2
  • HSPA8
  • HSPC3
  • HSPCA
  • HSPCB
  • PTGES3
Bos taurus (cattle)
Synthesis of glycosylphosphatidylinositol (GPI)
  • DPM2
  • GPI7
  • PIGA
  • PIGB
  • PIGC
  • PIGF
  • PIGG
  • PIGH
  • PIGL
  • PIGN
  • PIGP
  • PIGV
  • PIGW
  • PIGZ
Bos taurus (cattle)
Cytosolic sensors of pathogen-associated DNA
  • MRE11
Bos taurus (cattle)
MAPK1 (ERK2) activation
  • ERK2
  • IL6
  • IL6R
  • IL6ST
  • JAK1
  • JAK2
  • MAP2K2
  • MAPK1
  • PRKM1
  • PTPN11
  • TYK2
Bos taurus (cattle)
Negative regulation of FGFR2 signaling
  • AFGF
  • CBL
  • ERK2
  • FGF1
  • FGF10
  • FGF16
  • FGF17
  • FGF18
  • FGF2
  • FGF20
  • FGF23
  • FGF3
  • FGF4
  • FGF4A
  • FGF4C
  • FGF5
  • FGF5B
  • FGF5C
  • FGF6
  • FGF6A
  • FGF7
  • FGF7B
  • FGF8
  • FGF9
  • FGFA
  • FGFR2
  • FRS2
  • Fgf4
  • GRB2
  • HBGF-1
  • MAPK1
  • MAPK3
  • PRKM1
  • PTPN11
  • RPS27A
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
Negative regulation of FGFR1 signaling
  • AFGF
  • CBL
  • ERK2
  • FGF1
  • FGF10
  • FGF17
  • FGF2
  • FGF20
  • FGF23
  • FGF3
  • FGF4
  • FGF4A
  • FGF5
  • FGF5C
  • FGF6
  • FGF7B
  • FGF8
  • FGF9
  • FGFA
  • FGFR1
  • FRS2
  • Fgf4
  • GRB2
  • HBGF-1
  • KL
  • MAPK1
  • MAPK3
  • PRKM1
  • PTPN11
  • RPS27A
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
Negative regulation of FGFR3 signaling
  • AFGF
  • CBL
  • ERK2
  • FGF1
  • FGF16
  • FGF17
  • FGF18
  • FGF2
  • FGF20
  • FGF23
  • FGF4
  • FGF4A
  • FGF4C
  • FGF5
  • FGF6A
  • FGF8
  • FGF9
  • FGFA
  • FGFR3
  • FRS2
  • Fgf4
  • GRB2
  • HBGF-1
  • MAPK1
  • MAPK3
  • PRKM1
  • PTPN11
  • RPS27A
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
Regulation of KIT signaling
  • CBL
  • FYN
  • GRB2
  • KIT
  • KITLG
  • LCK
  • LYN
  • PTPN6
  • SCF
  • SH2B2
  • SOS1
  • SRC
  • YES1
Bos taurus (cattle)
TGF-beta receptor signaling activates SMADs
  • CBL
  • FKBP1
  • FKBP1A
  • FURIN
  • ITGAV
  • ITGB1
  • ITGB3
  • ITGB5
  • ITGB6
  • ITGB8
  • LTBP1
  • LTBP2
  • LTBP3
  • LTBP4
  • NEDD8
  • SMAD2
  • SMAD3
  • SMAD4
  • TGFB1
  • TGFB2
  • TGFB3
  • TGFBR1
  • TGFBR2
  • TGFBR3
  • UBC12
  • UBE2M
  • ZFYVE9
Bos taurus (cattle)

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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024