GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 526 - 550 of 557 in total
Pathway Name ▲ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Transcriptional regulation by the AP-2 (TFAP2) family of transcription factors
  • DEK
  • TFAP2A
Bos taurus (cattle)
Transferrin endocytosis and recycling
  • ATP6A1
  • ATP6AP1
  • ATP6B1
  • ATP6B2
  • ATP6C
  • ATP6D
  • ATP6E
  • ATP6G
  • ATP6G1
  • ATP6H
  • ATP6IP1
  • ATP6N1B
  • ATP6S1
  • ATP6S14
  • ATP6V0A1
  • ATP6V0A2
  • ATP6V0A4
  • ATP6V0B
  • ATP6V0C
  • ATP6V0D1
  • ATP6V0D2
  • ATP6V0E
  • ATP6V0E1
  • ATP6V0E2
  • ATP6V1A
  • ATP6V1A1
  • ATP6V1B1
  • ATP6V1B2
  • ATP6V1C1
  • ATP6V1C2
  • ATP6V1E1
  • ATP6V1E2
  • ATP6V1F
  • ATP6V1G1
  • ATP6V1G2
  • ATP6V1G3
  • ATP6V1H
  • HFE
  • LOC101904667
  • MCOLN1
  • STEAP3
  • STEAP4
  • TCIRG1
  • TF
  • TFR2
  • TFRC
  • VATC
  • VATF
  • VPATPD
Bos taurus (cattle)
Translocation of ZAP-70 to Immunological synapse
  • BLA-DQB
  • BOLA-DQA1
  • BOLA-DQA2
  • BOLA-DQA5
  • BOLA-DRA
  • BOLA-DRB2
  • BOLA-DRB3
  • BOLA-DYA
  • BOLA-DYB
  • BoLA-DIB
  • BoLA-DRA
  • BoLA-DYB
  • CD247
  • CD3D
  • CD3E
  • CD3G
  • CD4
  • DYB
  • HLA-DRA
  • LCK
  • LOC100848815
  • PTPN22
  • TRAV29-1
  • ZAP70
Bos taurus (cattle)
Transport of RCbl within the body
  • ABCC1
  • ABCD4
  • CD320
  • LDLRAP1
  • LMBRD1
  • LRP2
  • MRP1
  • TCN1
  • TCN2
Bos taurus (cattle)
Transport of bile salts and organic acids, metal ions and amine compounds
  • CTL2
  • CTL3
  • CTL4
  • SLC14A1
  • SLC14A2
  • SLC44A1
  • SLC44A2
  • SLC44A3
  • SLC44A4
  • SLC44A5
  • SLC47A2
  • SLC5A7
  • TPPT1
  • UT-B
Bos taurus (cattle)
Transport of gamma-carboxylated protein precursors from the endoplasmic reticulum to the Golgi apparatus
  • BGLAP
  • F10
  • F2
  • F7
  • F9
  • GAS6
  • PROC
  • PROS
  • PROS1
Bos taurus (cattle)
Transport of inorganic cations/anions and amino acids/oligopeptides
  • CTNS
  • EAAT1
  • GLAST
  • GLAST1
  • SAMC
  • SLC1A1
  • SLC1A2
  • SLC1A3
  • SLC1A6
  • SLC1A7
  • SLC25A26
  • SLC32A1
Bos taurus (cattle)
Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane
  • AAC1
  • AAC3
  • ANT1
  • ANT2
  • ANT3
  • ARL2
  • ARL2BP
  • BART1
  • SLC25A4
  • SLC25A5
  • SLC25A6
  • SLC28A1
  • SLC28A2
  • SLC28A3
  • SLC29A1
  • SLC29A2
  • SLC29A3
  • SLC29A4
Bos taurus (cattle)
Transport of organic anions
  • AVP
  • OATP3A1
  • OATPD
  • SLC16A2
  • SLC21A11
  • SLCO1A2
  • SLCO1B3
  • SLCO1C1
  • SLCO2A1
  • SLCO2B1
  • SLCO3A1
  • SLCO4A1
  • SLCO4C1
Bos taurus (cattle)
Transport of vitamins, nucleosides, and related molecules
  • PDZD11
  • SLC33A1
  • SLC5A6
Bos taurus (cattle)
Triglyceride biosynthesis
  • AGMO
  • DGAT1
  • GK
  • GK2
  • GPAM
  • GPAT2
  • LOC538702
  • LPIN1
  • LPIN2
  • LPIN3
  • MOGAT1
  • MOGAT3
Bos taurus (cattle)
UCH proteinases
  • ACTB
  • ACTL6A
  • ACTR5
  • ACTR8
  • ADRM1
  • ARP8
  • ASXL1
  • ASXL2
  • BAP1
  • BARD1
  • CCDC95
  • FOXK1
  • FOXK2
  • H2AC10
  • H2AC18
  • H2AC21
  • H2AC25
  • H2AC6
  • H2AW
  • HCFC1
  • HIST3H2A
  • INO80
  • INO80B
  • INO80C
  • INO80D
  • INO80E
  • KDM1B
  • LOC614881
  • MBD5
  • MBD6
  • MCRS1
  • NEDD8
  • NFRKB
  • OGT
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RPS27A
  • RUVBL1
  • SENP8
  • SUG1
  • TFPT
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • UCH37
  • UCHL1
  • UCHL3
  • UCHL5
  • YY1
Bos taurus (cattle)
Ub-specific processing proteases
  • ADA3
  • ADRB2
  • ADRM1
  • AR
  • ARHT1
  • ARRB1
  • ARRB2
  • ATXN7
  • AXIN1
  • AXIN2
  • BECN1
  • BIRC2
  • BIRC3
  • BIT1
  • CCNA1
  • CCNA2
  • CCP110
  • CDC20
  • CDC25A
  • CLSPN
  • CYLD
  • CYLD1
  • DDB2
  • FKBP8
  • FOXO4
  • GATA3
  • H2AC10
  • H2AC12
  • H2AC18
  • H2AC21
  • H2AC25
  • H2AC6
  • H2AW
  • H2B
  • H2BC26
  • H2BC5
  • HGS
  • HIF1A
  • HIST1H2BI
  • HIST3H2A
  • IDE
  • IFIH1
  • IKBKG
  • IL33
  • KAT2A
  • KEAP1
  • LOC112446467
  • LOC614881
  • LOC790134
  • MAP3K7
  • MAT2B
  • MDM2
  • MUL1
  • MYC
  • NEMO
  • NFKBIA
  • OTUB1
  • POLB
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • PTEN
  • PTRH2
  • RCE1
  • RHOT1
  • RIGI
  • RIPK1
  • RNF123
  • RNF128
  • RNF146B
  • RPS27A
  • RUVBL1
  • SIAH2
  • SKP2
  • SMAD1
  • SMAD2
  • SMAD3
  • SMAD4
  • SMAD7
  • SMURF2
  • STAM2
  • SUG1
  • TAB1
  • TADA2B
  • TADA3
  • TADA3L
  • TAF10
  • TAF9B
  • TGFBR1
  • TNKS
  • TNKS2
  • TOMM20
  • TOMM70
  • TOMM70A
  • TP53
  • TRAF2
  • TRAF6
  • TRAP2
  • TRRAP
  • Tom70
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • UFC1
  • UFD1
  • USP11
  • USP12
  • USP13
  • USP14
  • USP15
  • USP19
  • USP20
  • USP21
  • USP22
  • USP24
  • USP25
  • USP26
  • USP28
  • USP3
  • USP30
  • USP33
  • USP34
  • USP37
  • USP4
  • USP42
  • USP44
  • USP47
  • USP48
  • USP49
  • USP5
  • USP7
  • USP8
  • USP9X
  • VDAC1
  • VDAC2
  • VDAC3
  • VDAC5P
  • WDR20
  • WDR48
  • bIkBa
Bos taurus (cattle)
Ubiquinol biosynthesis
  • ADCK3
  • CABC1
  • COQ2
  • COQ3
  • COQ4
  • COQ5
  • COQ6
  • COQ7
  • COQ8A
  • COQ9
  • PDSS1
  • PDSS2
Bos taurus (cattle)
Ubiquitin Mediated Degradation of Phosphorylated Cdc25A
  • CDC25A
  • CHEK2
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RPS27A
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
Ubiquitin-dependent degradation of Cyclin D
  • CCND1
  • CDK4
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RPS27A
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
VEGF binds to VEGFR leading to receptor dimerization
  • FIGF
  • FLT1
  • FLT4
  • KDR
  • PGF
  • PLGF
  • VEGF
  • VEGFA
  • VEGFB
  • VEGFC
  • VEGFD
  • VRF
Bos taurus (cattle)
VEGF ligand-receptor interactions
  • FIGF
  • PGF
  • PLGF
  • VEGF
  • VEGFA
  • VEGFB
  • VEGFC
  • VEGFD
  • VRF
Bos taurus (cattle)
VEGFA-VEGFR2 Pathway
  • ABI1
  • ABI2
  • ARHA
  • AXL
  • BAIAP2
  • BCAR1
  • BRK1
  • C22H3ORF10
  • CDC42
  • CRK
  • CYBA
  • CYBB
  • CYFIP1
  • CYFIP2
  • DOCK1
  • ELMO2
  • FYN
  • HSP27
  • HSP90A
  • HSP90AA1
  • HSPB1
  • HSPCA
  • ITGAV
  • ITGB3
  • KDR
  • MAPK11
  • MAPK13
  • MAPK14
  • MAPKAPK2
  • MAPKAPK3
  • NCF1
  • NCF2
  • NCF4
  • NCK1
  • NCK2
  • NCKAP1L
  • PAK2
  • PIK3CA
  • PIK3CB
  • PIK3R1
  • PIK3R2
  • PRKACA
  • PRKACB
  • PTK2
  • PTK2B
  • PXN
  • RHO12
  • RHOA
  • ROCK1
  • ROCK2
  • SH2D2A
  • SHB
  • SHC2
  • SRC
  • VAV1
  • VAV2
  • VAV3
  • VEGF
  • VEGFA
  • WASF1
  • WASF2
  • WASF3
Bos taurus (cattle)
VEGFR2 mediated cell proliferation
  • KDR
  • KRAS
  • NRAS
  • PDPK1
  • PLCG1
  • PRKCB
  • PRKCB1
  • PRKCD
  • PRKCZ
  • RASA1
  • SPHK1
  • SRC
  • VEGF
  • VEGFA
Bos taurus (cattle)
VEGFR2 mediated vascular permeability
  • CALM
  • CAV1
  • CDH5
  • CTNNA1
  • CTNNB1
  • CTNND1
  • HSP90A
  • HSP90AA1
  • HSPCA
  • JUP
  • NOS3
  • PAK1
  • PAK2
  • PAK3
  • PDPK1
  • VAV1
  • VAV2
  • VAV3
Bos taurus (cattle)
Vasopressin regulates renal water homeostasis via Aquaporins
  • AQP1
  • AQP2
  • AQP3
  • AQP4
  • AVP
  • AVPR2
  • GNB1
  • GNB2
  • GNB3
  • GNB4
  • GNB5
  • GNG10
  • GNG11
  • GNG12
  • GNG13
  • GNG2
  • GNG3
  • GNG4
  • GNG5
  • GNG7
  • GNG8
  • GNGT1
  • GNGT12
  • GNGT2
  • GNGT3
  • GNGT5
  • GNGT7
  • GNGT8
  • MYO5B
  • PRKACA
  • PRKACB
  • PRKAR1A
  • PRKAR1B
  • PRKAR2A
  • RAB11A
  • RAB11FIP2
Bos taurus (cattle)
Vasopressin-like receptors
  • AVP
  • AVPR1A
  • AVPR1B
  • AVPR2
  • OXT
  • OXTR
Bos taurus (cattle)
Vitamin B2 (riboflavin) metabolism
  • ACP5
  • ENPP1
  • FLAD1
  • RFK
  • RFT2
  • SLC52A2
  • SLC52A3
Bos taurus (cattle)
Vitamin C (ascorbate) metabolism
  • CYB5
  • CYB5A
  • CYB5R3
  • DIA1
  • GLUT1
  • GSTO2
  • SLC23A1
  • SLC23A2
  • SLC2A1
  • SLC2A3
Bos taurus (cattle)

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Last updated: August 19, 2024