GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 176 - 200 of 557 in total
Pathway Name Protein Name ▲ UniProt ID Gene Symbol Organism GlyTouCan ID
Synthesis of Ketone Bodies
  • AACS
  • ACAT1
  • ACSS3
  • BDH
  • BDH1
  • BDH2
  • HMGCL
  • HMGCLL1
  • HMGCS2
Bos taurus (cattle)
Maturation of TCA enzymes and regulation of TCA cycle
  • ACAT1
  • ACN9
  • ACO2
  • CS
  • CSKMT
  • CYB560
  • FRDA
  • FXN
  • HBLD1
  • HBLD2
  • IDH2
  • ISCA1
  • ISCA2
  • ISCU
  • ISD11
  • LYRM4
  • LYRM8
  • NFS1
  • PGL2
  • SDH5
  • SDHA
  • SDHAF1
  • SDHAF2
  • SDHAF3
  • SDHB
  • SDHC
  • SDHD
  • SIRT3
Bos taurus (cattle)
Ketone body catabolism
  • ACAT1
  • BDH
  • BDH1
  • OXCT1
Bos taurus (cattle)
Highly calcium permeable postsynaptic nicotinic acetylcholine receptors
  • CHRNA1
  • CHRNA2
  • CHRNA3
  • CHRNA4
  • CHRNA5
  • CHRNA6
  • CHRNA7
  • CHRNA9
  • CHRNB2
  • CHRNB3
  • CHRNB4
Bos taurus (cattle)
Highly calcium permeable nicotinic acetylcholine receptors
  • CHRNA1
  • CHRNA2
  • CHRNA3
  • CHRNA4
  • CHRNA5
  • CHRNA6
  • CHRNB2
  • CHRNB3
  • CHRNB4
Bos taurus (cattle)
Highly sodium permeable postsynaptic acetylcholine nicotinic receptors
  • CHRNA3
  • CHRNA4
  • CHRNB2
  • CHRNB4
  • CHRND
  • CHRNE
  • CHRNG
Bos taurus (cattle)
Stimuli-sensing channels
  • ACCN1
  • ANO10
  • ANO2
  • ANO3
  • ANO4
  • ANO5
  • ANO6
  • ANO8
  • ANO9
  • ASIC1
  • ASIC2
  • ASIC4
  • ASIC5
  • ASPH
  • BEST1
  • BEST2
  • BEST3
  • BEST4
  • CALM
  • CLCA1
  • CLCA4
  • CLCN1
  • CLCN2
  • CLCN3
  • CLCN5
  • CLCN6
  • CLCN7
  • CLCNKA
  • CLIC2
  • FKBP12.6
  • FKBP1B
  • NALCN
  • NHEDC1
  • OSTM1
  • RYR2
  • SCNN1A
  • SCNN1B
  • SCNN1D
  • SCNN1G
  • SLC17A3
  • SLC9B2
  • SRI
  • STOM
  • STOML3
  • TMEM16D
  • TPCN1
  • TPCN2
  • TTYH1
  • TTYH2
  • TTYH3
  • UNC79
  • UNC80
Bos taurus (cattle)
Aspartate and asparagine metabolism
  • ASNS
  • ASPA
  • FOLH1B
  • GADL1
  • GOT1
  • GOT2
  • NAALAD2
  • SLC25A12
Bos taurus (cattle)
Citric acid cycle (TCA cycle)
  • ACO2
  • CS
  • CYB560
  • FH
  • HSP75
  • HSPC5
  • IDH2
  • IDH3A
  • IDH3B
  • IDH3G
  • MDH2
  • NNT
  • SDHA
  • SDHB
  • SDHC
  • SDHD
  • SUCLA2
  • SUCLG1
  • SUCLG2
  • TRAP1
Bos taurus (cattle)
Acrosome Reaction and Sperm:Oocyte Membrane Binding
  • ACR
  • CD9
  • IZUMO1
  • IZUMO2
  • IZUMO3
  • IZUMO4
Bos taurus (cattle)
EPHB-mediated forward signaling
  • ACTB
  • ACTG
  • ACTG1
  • ACTR2
  • ACTR3
  • ARHA
  • ARHGEF28
  • ARP2
  • ARP3
  • ARPC1A
  • ARPC1B
  • ARPC2
  • ARPC3
  • ARPC4
  • ARPC5
  • CDC42
  • ITSN1
  • PAK1
  • PTK2
  • RASA1
  • RHO12
  • RHOA
  • ROCK1
  • ROCK2
  • SDC2
  • WASL
Bos taurus (cattle)
RHOBTB2 GTPase cycle
  • ACTG
  • ACTG1
  • ACTN1
  • BAT1
  • CCT2
  • CCT6A
  • CCT7
  • CDC37
  • CUL3
  • DDX39B
  • HNRPC
  • HSP90A
  • HSP90AA1
  • HSP90AB1
  • HSPC3
  • HSPCA
  • HSPCB
  • MYO6
  • PHIP
  • RBMX
  • RHOBTB2
  • SFRS10
  • SRRM1
  • STK38
  • TMOD3
  • TRA2B
  • TWF1
  • TXNL1
  • UAP56
Bos taurus (cattle)
HSP90 chaperone cycle for SHRs
  • ACTR10
  • ACTR1A
  • AR
  • ARP10
  • CAPZA1
  • CAPZA2
  • CAPZA3
  • DCTN1
  • DCTN2
  • DCTN3
  • DCTN4
  • DCTN5
  • DCTN6
  • DNAJA1
  • DNAJA2
  • DNAJA4
  • DNAJB1
  • DNCL1
  • DYNC1H1
  • DYNC1I1
  • DYNC1LI1
  • DYNC1LI2
  • DYNLL1
  • DYNLL2
  • FKBP4
  • FKBP5
  • HSC70
  • HSP70-1
  • HSP90A
  • HSP90AA1
  • HSP90AB1
  • HSPA1A
  • HSPA1L
  • HSPA2
  • HSPA8
  • HSPC3
  • HSPCA
  • HSPCB
  • NR3C1
  • NR3C2
  • PGR
  • PTGES3
  • STIP1
Bos taurus (cattle)
ATF6 (ATF6-alpha) activates chaperones
  • ATF6
  • MBTPS1
  • MBTPS2
Bos taurus (cattle)
Signaling by BMP
  • ACTRII
  • ACVR2
  • ACVR2A
  • ACVR2B
  • ACVRL1
  • AMH
  • AMHR2
  • BMP10
  • BMP2
  • BMPR1A
  • BMPR1B
  • BMPR2
  • CER1
  • CHRDL1
  • FSTL1
  • GDF2
  • INHA
  • INHBA
  • NOG
  • SF3A2
  • SKI
  • SMAD1
  • SMAD4
  • SMAD5
  • SMAD6
  • SMAD7
  • SMAD9
  • SMURF1
  • SMURF2
  • TGFBR3
  • UBE2D1
  • UBE2D3
  • ZFYVE16
Bos taurus (cattle)
Signaling by Activin
  • ACTRII
  • ACVR1B
  • ACVR1C
  • ACVR2
  • ACVR2A
  • ACVR2B
  • ERK2
  • INHA
  • INHBA
  • INHBB
  • MAPK1
  • MAPK3
  • PRKM1
  • SMAD2
  • SMAD3
  • SMAD4
  • TGFBR3
Bos taurus (cattle)
Complex I biogenesis
  • ACAD9
  • CI-B14-5A
  • COA1
  • ECSIT
  • GRIM19
  • HRPAP20
  • LOC101906178
  • MGC152111
  • MT-ND3
  • MT-ND4
  • MT-ND6
  • MTND3
  • MTND4
  • MTND6
  • NADH3
  • NADH4
  • NADH6
  • ND1
  • ND2
  • ND3
  • ND4
  • ND5
  • ND6
  • NDUFA1
  • NDUFA10
  • NDUFA11
  • NDUFA13
  • NDUFA2
  • NDUFA3
  • NDUFA5
  • NDUFA6
  • NDUFA7
  • NDUFA8
  • NDUFA9
  • NDUFAB1
  • NDUFAF1
  • NDUFAF2
  • NDUFAF3
  • NDUFAF4
  • NDUFAF5
  • NDUFAF6
  • NDUFAF7
  • NDUFB1
  • NDUFB10
  • NDUFB11
  • NDUFB2
  • NDUFB3
  • NDUFB5
  • NDUFB6
  • NDUFB7
  • NDUFB8
  • NDUFB9
  • NDUFC1
  • NDUFC2
  • NDUFS1
  • NDUFS2
  • NDUFS3
  • NDUFS4
  • NDUFS5
  • NDUFS6
  • NDUFS7
  • NDUFS8
  • NDUFV1
  • NDUFV2
  • NUBPL
  • TIMMDC1
  • TMEM126B
  • TMEM186
  • UQOR22
Bos taurus (cattle)
Respiratory electron transport
  • CI-B14-5A
  • COA1
  • COB
  • COII
  • COQ10A
  • COQ10B
  • COX1
  • COX11
  • COX14
  • COX16
  • COX18
  • COX19
  • COX2
  • COX20
  • COX3
  • COX4
  • COX4I1
  • COX5A
  • COX6A1
  • COX6C
  • COX7A2L
  • COX7B
  • COX7C
  • COX7CP1
  • COXII
  • CYC
  • CYC1
  • CYCS
  • CYTB
  • GRIM19
  • LOC100296227
  • LOC101906178
  • LOC783202
  • LRPPRC
  • MT-CO2
  • MT-CYB
  • MT-ND3
  • MT-ND4
  • MT-ND6
  • MTCO2
  • MTCYB
  • MTND3
  • MTND4
  • MTND6
  • NADH3
  • NADH4
  • NADH6
  • ND1
  • ND2
  • ND3
  • ND4
  • ND5
  • ND6
  • NDUFA1
  • NDUFA10
  • NDUFA11
  • NDUFA13
  • NDUFA2
  • NDUFA3
  • NDUFA4
  • NDUFA5
  • NDUFA6
  • NDUFA7
  • NDUFA8
  • NDUFA9
  • NDUFAB1
  • NDUFB1
  • NDUFB10
  • NDUFB11
  • NDUFB2
  • NDUFB3
  • NDUFB5
  • NDUFB6
  • NDUFB7
  • NDUFB8
  • NDUFB9
  • NDUFC1
  • NDUFC2
  • NDUFS1
  • NDUFS2
  • NDUFS3
  • NDUFS4
  • NDUFS5
  • NDUFS6
  • NDUFS7
  • NDUFS8
  • NDUFV1
  • NDUFV2
  • SCO1
  • SCO2
  • SCOD1
  • SURF1
  • TACO1
  • TMEM186
  • UQCR10
  • UQCRB
  • UQCRC1
  • UQCRC2
  • UQCRFS1
  • UQCRH
  • UQCRQ
  • UQOR22
Bos taurus (cattle)
Glycerophospholipid biosynthesis
  • AGK
  • CPNE1
  • CPNE3
  • CPNE6
  • CPNE7
Bos taurus (cattle)
Arachidonic acid metabolism
  • AWAT1
  • CPLA2
  • FAAH
  • PLA2G4
  • PLA2G4A
Bos taurus (cattle)
Caspase-mediated cleavage of cytoskeletal proteins
  • ADD1
  • CASP3
  • CASP6
  • CASP7
  • CASP8
  • GAS2
  • GSN
  • PLEC
  • SORBS2
  • SPTAN1
  • VIM
Bos taurus (cattle)
Transcriptional and post-translational regulation of MITF-M expression and activity
  • AIMP2
  • CREBBP
  • DARS1
  • EEF1E1
  • EPRS1
  • ERK2
  • GSK3B
  • HINT1
  • IARS
  • IARS1
  • JTV1
  • KARS1
  • KIT
  • KITLG
  • LARS1
  • MAPK1
  • MAPK3
  • MARS1
  • MITF
  • PRKM1
  • QARS
  • QARS1
  • RARS
  • RARS1
  • RPS6KA1
  • SCF
  • WNT3A
  • XPO1
Bos taurus (cattle)
Adenosine P1 receptors
  • ADORA1
  • ADORA2A
  • ADORA2B
  • ADORA3
Bos taurus (cattle)
Bicarbonate transporters
  • AHCYL2
  • SLC4A1
  • SLC4A10
  • SLC4A2
  • SLC4A3
  • SLC4A4
  • SLC4A5
  • SLC4A7
  • SLC4A8
  • SLC4A9
Bos taurus (cattle)
G alpha (z) signalling events
  • ADCY1
  • ADCY2
  • ADCY3
  • ADCY4
  • ADCY5
  • ADCY6
  • ADCY8
  • ADCY9
  • ADRA2A
  • ADRA2B
  • ADRA2C
  • GNAZ
  • GNB1
  • GNB2
  • GNB3
  • GNB4
  • GNB5
  • GNG10
  • GNG11
  • GNG12
  • GNG13
  • GNG2
  • GNG3
  • GNG4
  • GNG5
  • GNG7
  • GNG8
  • GNGT1
  • GNGT12
  • GNGT2
  • GNGT3
  • GNGT5
  • GNGT7
  • GNGT8
  • RGS16
  • RGS17
  • RGS20
Bos taurus (cattle)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

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Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024