GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 126 - 150 of 252 in total
Pathway Name Protein Name UniProt ID Gene Symbol ▼ Organism GlyTouCan ID
Vitamin B2 (riboflavin) metabolism
  • TRAP
  • acp5
  • acp5a
  • enpp1
  • flad1
  • rft2a
  • sb:cb576
  • si:ch211-142e24.2
  • slc52a3a
  • wu:fb19f01
  • wu:fb30b03
  • wu:fi14e01
  • wu:fj66f03
  • zgc:136238
  • zgc:63825
Danio rerio (zebrafish)
Class C/3 (Metabotropic glutamate/pheromone receptors)
  • T2R2
  • TAS1R1
  • TAS1R2a
  • TAS1R3
  • TAS2R1a
  • TAS2R1b
  • Tas1R2b
  • gb:kf234084
  • gprc6a
  • grm1
  • grm1b
  • grm2b
  • grm3
  • grm5a
  • grm5b
  • grm6a
  • grm7
  • grm8a
  • si:ch211-233h19.1
  • si:ch211-278p9.5
  • si:dkey-52h10.3
  • t1rc1
  • tas1r1
  • tas1r2.1
  • tas1r2.2
  • tas1r2a
  • tas1r2b
  • tas1r3
  • tas2r1a
  • tas2r200.1
  • tas2r200.2
  • tas2r2l
Danio rerio (zebrafish)
Downstream signal transduction
  • Stat5
  • crk
  • crkl
  • fb18e12
  • fb34h10
  • fc05a01
  • fd20h08
  • fi19g05
  • fj46f04
  • fj59e07
  • grb2
  • grb2a
  • grb2b
  • hrasb
  • hrasl
  • im:7147817
  • nck1b
  • nck2b
  • nras
  • pdgfab
  • pdgfbb
  • pdgfra
  • pik3ca
  • pik3cb
  • pik3r1
  • pik3r2
  • plcg1
  • sb:eu508
  • sb:eu615
  • si:ch211-147g19.3
  • sos1
  • src
  • stat1
  • stat1a
  • stat5
  • stat5.1
  • stat5.2
  • stat5a
  • stat5b
  • stat6
  • stat7
  • wu:fa55g05
  • wu:fb18e12
  • wu:fb34e06
  • wu:fb34h10
  • wu:fb65b05
  • wu:fc05a01
  • wu:fc32c12
  • wu:fc54a04
  • wu:fd20h08
  • wu:fi19g05
  • wu:fj46f04
  • wu:fj57a05
  • wu:fj59e07
  • wu:fj60e01
  • wu:fj66g07
  • zgc:100936
  • zgc:103549
  • zgc:110734
  • zgc:153249
  • zgc:158274
  • zgc:63469
  • zgc:73077
  • zgc:92024
Danio rerio (zebrafish)
Multifunctional anion exchangers
  • SLC26A6
  • si:dkey-31f5.2
  • slc26a11
  • slc26a2
  • slc26a3
  • slc26a3.1
  • slc26a6l
  • slc5a12
  • smctn
  • wu:fd14d06
  • zgc:64158
Danio rerio (zebrafish)
Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell
  • SCN2B
  • cb810
  • cd226
  • cd40
  • cd40lg
  • cxadr
  • dl3
  • itga4
  • itgb1
  • itgb1b
  • itgb1b.1
  • itgb1b.2
  • mag
  • nectin1b
  • pvrl1b
  • sb:cb1043
  • sc:d147
  • scn2b
  • si:ch211-231h20.3
  • si:ch211-264f5.2
  • si:ch73-208g10.1
  • siglec-4
  • tnfsf10
  • tnfsf10l2
  • tnfsf10l4
  • zgc:113297
  • zgc:158817
  • zgc:85632
  • zgc:92320
Danio rerio (zebrafish)
Regulation of PTEN gene transcription
  • RRAGB
  • frap1
  • gbl
  • lamtor2
  • lamtor3
  • lamtor4
  • lamtor5
  • lst8
  • maf1b
  • mapksp1
  • mlst8
  • mtor
  • rheb
  • rptor
  • rraga
  • rragc
  • rragca
  • si:ch73-174h16.3
  • si:dkey-176g4.2
  • slc38a9
  • tor
  • wu:fc22h08
  • wu:fc68h09
  • wu:fi23d09
  • zgc:111971
  • zgc:56499
  • zgc:73144
Danio rerio (zebrafish)
Energy dependent regulation of mTOR by LKB1-AMPK
  • RRAGB
  • cb116
  • frap1
  • gbl
  • im:7154392
  • lamtor2
  • lamtor3
  • lamtor4
  • lamtor5
  • lst8
  • mapksp1
  • mlst8
  • mtor
  • prkaa1
  • prkab1a
  • prkag1
  • rheb
  • rptor
  • rraga
  • rragc
  • rragca
  • sb:cb130
  • si:dkey-176g4.2
  • slc38a9
  • tor
  • wu:fa94c10
  • wu:fa94d09
  • wu:fc22h08
  • wu:fc68h09
  • wu:fd12h04
  • zgc:111971
  • zgc:56499
  • zgc:63896
  • zgc:73144
  • zgc:92228
Danio rerio (zebrafish)
Amino acids regulate mTORC1
  • RRAGB
  • atp6e
  • atp6v0cb
  • atp6v0d1
  • atp6v1ab
  • atp6v1ba
  • atp6v1c1
  • atp6v1c1a
  • atp6v1d
  • atp6v1e1
  • atp6v1e1b
  • atp6v1f
  • atp6v1g1
  • atp6v1h
  • atpv0e2
  • cb927
  • chunp6890
  • chunp6932
  • cto
  • fb52g11
  • fj35f08
  • frap1
  • gbl
  • lamtor2
  • lamtor3
  • lamtor4
  • lamtor5
  • lst8
  • mapksp1
  • mlst8
  • mtor
  • rheb
  • rptor
  • rraga
  • rragc
  • rragca
  • sh3bp4
  • sh3bp4a
  • si:dkey-176g4.2
  • slc38a9
  • tcirg1
  • tcirg1b
  • tor
  • vatB1
  • wu:fa12a02
  • wu:fb44e06
  • wu:fb52g11
  • wu:fc22h08
  • wu:fc68h09
  • wu:fc74d11
  • wu:fi46h07
  • wu:fj35f08
  • wu:fq38h02
  • zgc:109987
  • zgc:111904
  • zgc:111971
  • zgc:55524
  • zgc:56499
  • zgc:73144
  • zgc:73282
  • zgc:77708
  • zgc:92923
Danio rerio (zebrafish)
MTOR signalling
  • RRAGB
  • akt3b
  • frap1
  • gbl
  • lamtor2
  • lamtor3
  • lamtor4
  • lamtor5
  • lst8
  • mapksp1
  • mlst8
  • mtor
  • rheb
  • rptor
  • rraga
  • rragc
  • rragca
  • si:dkey-176g4.2
  • slc38a9
  • tor
  • wu:fc22h08
  • wu:fc68h09
  • ywhab
  • ywhab2
  • ywhabb
  • zgc:111971
  • zgc:56499
  • zgc:73144
Danio rerio (zebrafish)
mTORC1-mediated signalling
  • RRAGB
  • S6K1
  • eif4ea
  • eif4ebp1
  • fc04h09
  • fc51h01
  • fkbp1b
  • frap1
  • gbl
  • lamtor2
  • lamtor3
  • lamtor4
  • lamtor5
  • lst8
  • mapksp1
  • mlst8
  • mtor
  • rheb
  • rps6
  • rps6kb1
  • rps6kb1b
  • rptor
  • rraga
  • rragc
  • rragca
  • si:dkey-176g4.2
  • si:dkeyp-115a10.1
  • slc38a9
  • tor
  • wu:fa92e06
  • wu:fb64g06
  • wu:fc04h09
  • wu:fc22h08
  • wu:fc51h01
  • wu:fc68h09
  • ywhab
  • ywhab2
  • ywhabb
  • zgc:111971
  • zgc:55713
  • zgc:56499
  • zgc:73144
  • zgc:73381
Danio rerio (zebrafish)
p75NTR recruits signalling complexes
  • RICK
  • hal
  • hm:zeh0386
  • ik:tdsubc_1f2
  • myd88
  • ngf
  • ngfb
  • ngfrb
  • ngfrl
  • p62
  • prkci
  • ripk2
  • rps27a
  • sb:cb621
  • sqstm1
  • tdsubc_1f2
  • traf6
  • uba52
  • wu:fa91f08
  • xx:tdsubc_1f2
  • zgc:123344
  • zgc:66168
  • zgc:85784
Danio rerio (zebrafish)
Pentose phosphate pathway
  • RBKS
  • Tal
  • dera
  • fi03d03
  • ik:tdsubc_2c8
  • pgd
  • pgm2
  • rbks
  • rpe
  • rpia
  • taldo1
  • wu:fa07h08
  • wu:fb93d11
  • wu:fc20b11
  • wu:fc32g02
  • wu:fi03d03
  • xx:tdsubc_2c8
  • zgc:101610
  • zgc:103524
  • zgc:111848
  • zgc:55585
  • zgc:66054
  • zgc:77113
  • zgc:86813
Danio rerio (zebrafish)
Class B/2 (Secretin family receptors)
  • PTH
  • crf
  • crh
  • crhb
  • crhbp
  • pth1
  • pth1a
  • pth1r
  • pth1ra
  • pth2
  • pth2r
  • pth2ra
  • pthlh
  • pthlha
  • pthr1
  • pthr2
  • pthrp
  • si:ch211-286m4.5
  • tip39
  • zPTH1R
  • zgc:101864
  • zgc:123155
  • zgc:91905
Danio rerio (zebrafish)
Proton/oligopeptide cotransporters
  • PEPT1
  • fd47f07
  • slc15a1
  • slc15a1b
  • slc15a2
  • wu:fd47f07
Danio rerio (zebrafish)
NGF processing
  • PCSK5
  • furin
  • furina
  • ngf
  • ngfb
  • pcsk5
  • pcsk5b
  • si:dkey-281a24.5
  • zgc:165659
Danio rerio (zebrafish)
Electric Transmission Across Gap Junctions
  • PANX
  • connexin35
  • cx35
  • cx35b
  • cx52.7
  • gja10a
  • gja9
  • gjd2b
  • panx1
  • panx1a
  • panx2
  • si:ch211-192n14.2
  • zgc:194445
  • zgc:194451
  • zgc:55631
Danio rerio (zebrafish)
Platelet homeostasis
  • P2X.514
  • P2X3
  • fb99b08
  • p2rx1
  • p2rx2
  • p2rx3
  • p2rx3a
  • p2rx5
  • p2rx7
  • p2rx8
  • p2x3
  • p2x5
  • p2xr1
  • p2xr2
  • p2xr514
  • p2xr7
  • wu:fb99b08
  • zP2X3
  • zfP2X3
Danio rerio (zebrafish)
Elevation of cytosolic Ca2+ levels
  • P2X.514
  • P2X3
  • bZ1P14.9
  • fb99b08
  • p2rx1
  • p2rx2
  • p2rx3
  • p2rx3a
  • p2rx5
  • p2rx7
  • p2rx8
  • p2x3
  • p2x5
  • p2xr1
  • p2xr2
  • p2xr514
  • p2xr7
  • si:rp71-1p14.9
  • trpc6
  • trpc6a
  • trpc7b
  • wu:fb99b08
  • zP2X3
  • zfP2X3
Danio rerio (zebrafish)
Opsins
  • Opn5m
  • lws1
  • lws2
  • opn1lw1
  • opn1lw2
  • opn1sw1
  • opn1sw2
  • opn3
  • opn4
  • opn4a
  • opn4d
  • opn4m1
  • opn5
  • rdops
  • rgr
  • rgr1
  • rgra
  • rho
  • rrh
  • si:ch211-105n9.2
  • sws1
  • uvops
  • zfo2
  • zgc:103757
  • zgc:110660
Danio rerio (zebrafish)
Regulation of FZD by ubiquitination
  • NgR
  • ZG06
  • Zfz8b
  • Zwnt[a]
  • fz2
  • fz5
  • fz6
  • fz8a
  • fz8b
  • fz8c
  • fzA
  • fzc
  • fzd5
  • fzd6
  • fzd8a
  • fzd8b
  • fzd8c
  • hm:zeh0386
  • ik:tdsubc_1e1
  • ik:tdsubc_1f2
  • lrp6
  • ngr
  • rps27a
  • rspo1
  • rspo2
  • rspo3
  • rspo4
  • rtn4r
  • si:ch211-149p10.1
  • si:dkey-107i16.4
  • tdsubc_1f2
  • uba52
  • wnt3
  • wnt3 l
  • wnt3a
  • wnt3l
  • wnt[a]
  • wu:fa91f08
  • wu:fd02c05
  • xx:tdsubc_1e1
  • xx:tdsubc_1f2
  • zfzA
  • zg02
  • zg05
  • zgc:123344
  • zgc:65879
  • zgc:66168
  • zgc:77440
  • znrf3
Danio rerio (zebrafish)
Surfactant metabolism
  • NaPi-IIb2
  • a2aa
  • ada2a
  • adora2a.1
  • adora2aa
  • adora2b
  • cecr1
  • cecr1a
  • ckap4
  • dhhc2
  • etID42583.2
  • fb68b07
  • hbl3
  • hbl4
  • mbl
  • mbl2
  • scara5
  • si:ch211-284o19.5
  • si:dkey-13b16.1
  • slc34a2b
  • wu:fb68b07
  • wu:fi68d06
  • zdhhc2
  • zgc:109836
Danio rerio (zebrafish)
Glycosphingolipid catabolism
  • NSMase
  • asah2
  • gba2
  • gba3
  • im:6912336
  • im:6912508
  • nSMase2
  • neu3.2
  • neu3.3
  • neu3.5
  • neu4
  • neuc.1
  • sb:eu489
  • si:ch73-316n6.2
  • si:dkey-11j5.6
  • smpd2
  • smpd2a
  • smpd3
  • smpd4
  • zgc:100806
  • zgc:109998
  • zgc:153998
Danio rerio (zebrafish)
Collagen degradation
  • MMPLf
  • ZFMMP-9
  • col27a1
  • col27a1b
  • fj05a08
  • mmp2
  • mmp30
  • mmp9
  • phykpl
  • prss1
  • prss2a
  • prss59.1
  • prss59.2
  • si:ch73-103b2.3
  • si:dkey-33m11.8
  • try
  • tryl
  • wu:fa99h12
  • wu:fb02g06
  • wu:fb07b05
  • wu:fb57g08
  • wu:fb61f11
  • wu:fd14c02
  • wu:fi98c09
  • wu:fj05a08
  • wu:fk89d01
  • zgc:109701
  • zgc:136396
  • zgc:64165
  • zgc:66382
Danio rerio (zebrafish)
Arachidonate production from DAG
  • MGLL
  • abhd12
  • cb909
  • dagla
  • mgll
  • wu:fc66g01
  • zgc:56561
Danio rerio (zebrafish)
Organic anion transporters
  • MGC163045
  • blu
  • cb229
  • fa07h09
  • sb:cb229
  • sb:cb809
  • si:ch211-200a16.4
  • slc17a5
  • slc17a6
  • slc17a6b
  • slc17a7
  • slc17a7a
  • slc17a8
  • slc25a10
  • slc25a10b
  • slc25a11
  • slc25a18
  • slc25a1b
  • slc25a22
  • slc25a55a
  • slc25a55b
  • slc5a5
  • slc5a8
  • slc5a8l
  • smcte
  • vglut1
  • vglut2.1
  • vglut2a
  • vglut3
  • wu:fa07h09
  • wu:fa12h05
  • wu:fb72h03
  • zgc:153077
  • zgc:56592
  • zgc:56614
  • zgc:86898
Danio rerio (zebrafish)

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Last updated: August 19, 2024