GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 101 - 125 of 250 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Cytoprotection by HMOX1
  • YOR1
  • YRS1
Saccharomyces cerevisiae (brewer's yeast)
VEGFR2 mediated vascular permeability
  • AVO1
  • AVO3
  • BIT2
  • BIT61
  • CPR1
  • DRR2
  • HSC82
  • HSP82
  • HSP90
  • KOM1
  • LST8
  • NCP1
  • NCPR1
  • PKH2
  • PRD1
  • SCH9
  • SLI2
  • TOR2
  • TSC11
  • TSC14
  • YPK1
Saccharomyces cerevisiae (brewer's yeast)
RND1 GTPase cycle
  • ASC1
  • BUD2
  • CCS1
  • CLA2
  • CTN5
  • ERC25
  • ERE2
  • GLC1
  • GLC4
  • GLC5
  • HFD1
  • IRA1
  • IRA2
  • PPD1
  • RAS2
  • RHO1
  • RHO2
  • RHO3
  • RHO4
  • RTT10
  • STI1
  • TRE1
  • TRE2
  • TRM734
  • VPS70
Saccharomyces cerevisiae (brewer's yeast)
Translesion Synthesis by POLH
  • BUF1
  • BUF2
  • CDC44
  • CDC48
  • DBH1
  • HRD4
  • NPL4
  • PIP3
  • POL30
  • RAD30
  • RFA1
  • RFA2
  • RFC1
  • RFC2
  • RFC3
  • RFC4
  • RFC5
  • RPA1
  • SCD2
  • UBI4
  • UFD1
Saccharomyces cerevisiae (brewer's yeast)
Glutathione synthesis and recycling
  • CIS2
  • DUG1
  • ECM38
  • GCG1
  • GSH2
  • OXP1
Saccharomyces cerevisiae (brewer's yeast)
Signal transduction by L1
  • DAC2
  • FUS3
  • HOG4
  • KSS1
  • MKK1
  • MKK2
  • MPK1
  • PBS2
  • SFS4
  • SLT2
  • SMK1
  • SSK4
  • SSP32
  • SSP33
  • STE7
Saccharomyces cerevisiae (brewer's yeast)
Synthesis of PIPs at the plasma membrane
  • ARF1
  • ARF2
  • BEB1
  • BOB1
  • BOI1
  • BOI2
  • GIN7
  • INP51
  • INP52
  • INP53
  • INP54
  • LSB6
  • MSS4
  • SJL1
  • SJL2
  • SJL3
  • SOP2
  • TEP1
  • YMR1
Saccharomyces cerevisiae (brewer's yeast)
Rap1 signalling
  • BUD1
  • BUD5
  • CDC25
  • CTN1
  • EIS4
  • LTE1
  • MSI2
  • RSR1
Saccharomyces cerevisiae (brewer's yeast)
Galactose catabolism
  • GA-5
  • GAL10
  • GAL5
  • PGM1
  • PGM2
Saccharomyces cerevisiae (brewer's yeast)
MTOR signalling
  • GTR1
  • GTR2
  • RHB1
  • RSG1
Saccharomyces cerevisiae (brewer's yeast)
RNA Polymerase II Pre-transcription Events
  • BTF1
  • BUR2
  • CBC1
  • CBC2
  • CBP20
  • CBP80
  • CCL1
  • CDC68
  • CST4
  • CTK1
  • CTK2
  • FCP1
  • FUN81
  • GCR3
  • KIN28
  • LOM3
  • MPT1
  • MUD13
  • POB3
  • RAD25
  • RAD3
  • REM1
  • RIG2
  • RPA7
  • RPB1
  • RPB10
  • RPB11
  • RPB12
  • RPB150
  • RPB2
  • RPB220
  • RPB3
  • RPB4
  • RPB5
  • RPB6
  • RPB7
  • RPB8
  • RPB9
  • RPC10
  • RPC9
  • RPO21
  • RPO22
  • RPO26
  • SAE1
  • SPT15
  • SPT16
  • SPT3
  • SPT4
  • SPT5
  • SSF1
  • SSL1
  • SSL2
  • SSU71
  • STO1
  • SUA7
  • SUA8
  • SUT1
  • TAF1
  • TAF10
  • TAF11
  • TAF12
  • TAF13
  • TAF130
  • TAF145
  • TAF150
  • TAF17
  • TAF19
  • TAF2
  • TAF23
  • TAF25
  • TAF4
  • TAF40
  • TAF48
  • TAF5
  • TAF6
  • TAF60
  • TAF61
  • TAF67
  • TAF68
  • TAF7
  • TAF9
  • TAF90
  • TBP1
  • TFA1
  • TFA2
  • TFB1
  • TFB2
  • TFB3
  • TFB4
  • TFB5
  • TFG1
  • TFG2
  • TOA1
  • TOA2
  • TSG2
  • TSM1
  • UVS112
Saccharomyces cerevisiae (brewer's yeast)
RAB geranylgeranylation
  • BET2
  • BET4
  • MRS6
  • MSI4
  • SEC4
  • SRO6
  • VAM4
  • VPS12
  • VPS21
  • VPT12
  • YHR022C
  • YP2
  • YPT1
  • YPT10
  • YPT11
  • YPT21
  • YPT31
  • YPT32
  • YPT51
  • YPT52
  • YPT53
  • YPT6
  • YPT7
  • YPT8
Saccharomyces cerevisiae (brewer's yeast)
Phosphate bond hydrolysis by NTPDase proteins
  • GDA1
  • YND1
Saccharomyces cerevisiae (brewer's yeast)
Major pathway of rRNA processing in the nucleolus and cytosol
  • BMS1
  • CRY2
  • CSL4
  • DBP8
  • DHR1
  • DIP2
  • DOB1
  • EBP2
  • ECM16
  • ECM20
  • EMG1
  • ERB1
  • FCF1
  • FMI1
  • GRC3
  • IMP3
  • IMP4
  • IPI1
  • IPI2
  • IPI3
  • KRE31
  • KRR1
  • LAS1
  • LOT3
  • LRP1
  • MPP10
  • MTR3
  • MTR4
  • NAN1
  • NEP1
  • NOC4
  • NOP1
  • NOP14
  • NOP5
  • NOP56
  • NOP58
  • NOP7
  • NUG1
  • PWP2
  • RCL1
  • RIX1
  • ROK1
  • RPS101
  • RPS102
  • RPS10A
  • RPS10B
  • RPS13A
  • RPS13B
  • RPS14B
  • RPS2
  • RPS30
  • RPS4
  • RPS6A
  • RPS6B
  • RPS7A
  • RPS9A
  • RPS9B
  • RRP13
  • RRP3
  • RRP36
  • RRP4
  • RRP40
  • RRP41
  • RRP42
  • RRP43
  • RRP45
  • RRP46
  • RRP47
  • RRP5
  • RRP6
  • RRP7
  • RRP9
  • RTC1
  • SAS10
  • SIK1
  • SKI4
  • SKI6
  • SMT4
  • SNU13
  • SOF1
  • SUP38
  • SUP44
  • SUP46
  • ULP1
  • ULP2
  • UNC733
  • UTP1
  • UTP10
  • UTP11
  • UTP12
  • UTP13
  • UTP14
  • UTP15
  • UTP17
  • UTP18
  • UTP19
  • UTP2
  • UTP20
  • UTP21
  • UTP22
  • UTP25
  • UTP3
  • UTP4
  • UTP5
  • UTP6
  • UTP7
  • YC1D
  • YPH1
  • YS11A
  • YTM1
Saccharomyces cerevisiae (brewer's yeast)
Beta-oxidation of very long chain fatty acids
  • ECI1
  • FOX3
  • PAL1
  • PAT2
  • POT1
  • POX3
  • PTE1
  • PXA1
  • SPS19
  • SPX19
  • SSH2
  • TES1
Saccharomyces cerevisiae (brewer's yeast)
Glycogen breakdown (glycogenolysis)
  • GA-5
  • GAL5
  • GDB1
  • GLG1
  • GLG2
  • GPH1
  • IDS2
  • PGM1
  • PGM2
Saccharomyces cerevisiae (brewer's yeast)
HATs acetylate histones
  • ACA1
  • ACA2
  • ACR1
  • CST6
  • H2B1
  • H2B2
  • HAT1
  • HAT2
  • HHF1
  • HHF2
  • HTB1
  • HTB2
  • SKO1
  • SPT12
Saccharomyces cerevisiae (brewer's yeast)
Formation of the active cofactor, UDP-glucuronate
  • UGP1
Saccharomyces cerevisiae (brewer's yeast)
Heme biosynthesis
  • ADP1
  • COX10
  • COX15
  • CYD1
  • HEM1
  • HEM12
  • HEM13
  • HEM14
  • HEM15
  • HEM2
  • HEM3
  • HEM4
  • HEM6
  • ORF1
  • POP3
Saccharomyces cerevisiae (brewer's yeast)
Lysine catabolism
  • ARO8
  • ARO9
  • LYS13
  • LYS9
  • YGL159W
Saccharomyces cerevisiae (brewer's yeast)
RHOQ GTPase cycle
  • BUD15
  • BZZ1
  • CDC42
  • CLA4
  • CYK1
  • DIM2
  • ECM25
  • EDE1
  • END3
  • HSS7
  • IQG1
  • IRS4
  • LSB7
  • MDP1
  • MDP3
  • MIP3
  • NPI1
  • PAN1
  • RHO5
  • RSP5
  • SEC9
  • SKM1
  • SLA1
  • SPO20
  • SRO2
  • STE20
  • TRE1
  • TRE2
  • VAM4
  • VPS70
  • YPT7
Saccharomyces cerevisiae (brewer's yeast)
G alpha (12/13) signalling events
  • BUD15
  • CDC70
  • DAC1
  • DIM2
  • EDE1
  • END3
  • FUS2
  • GPA1
  • IRS4
  • MDP3
  • MIP3
  • PAN1
  • RHO1
  • RHO2
  • RHO3
  • RHO4
  • SCG1
Saccharomyces cerevisiae (brewer's yeast)
mTORC1-mediated signalling
  • FKB1
  • FPR1
  • NOP13
  • RBP1
  • RPS101
  • RPS102
  • RPS10A
  • RPS10B
  • RPS6A
  • RPS6B
  • STM1
  • TIF3
  • TIF42
  • TIF4631
  • YPK3
Saccharomyces cerevisiae (brewer's yeast)
Peroxisomal protein import
  • CPR1
  • CTA1
  • ECI1
  • FAT1
  • FOX1
  • FOX3
  • IDP1
  • NCP1
  • NCPR1
  • PAS10
  • PAS20
  • PAS4
  • PAS7
  • PCD1
  • PEB1
  • PEX10
  • PEX12
  • PEX13
  • PEX14
  • PEX5
  • PEX7
  • POT1
  • POX1
  • POX3
  • PRD1
  • PTE1
  • PXP1
  • SCD2
  • SPS19
  • SPX19
  • STE23
  • SYM1
  • TES1
  • UBC4
  • UBC5
  • UBI4
  • YJR154W
Saccharomyces cerevisiae (brewer's yeast)
VLDLR internalisation and degradation
  • AMP1
  • APL1
  • APL2
  • APL3
  • APM4
  • APS2
  • CHC1
  • CLC1
  • OSW3
  • PRB1
  • RRT12
  • YAP17
  • YAP80
  • YSP3
Saccharomyces cerevisiae (brewer's yeast)

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Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024