GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 226 - 250 of 360 in total
Pathway Name ▼ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Inhibition of TSC complex formation by PKB
  • AKT2
  • TSC1
  • TSC2
Sus scrofa (pig)
Inactivation, recovery and regulation of the phototransduction cascade
  • CALM3
  • CAMKMT
  • CNGA1
  • CNGB1
  • GNB5
  • GRK1
  • GRK4
  • GRK7
  • GUCA1B
  • GUCY2D
  • METAP1
  • METAP2
  • NMT1
  • NMT2
  • PDE6A
  • PDE6G
  • PPEF1
  • RCVRN
  • RGS9
  • RGS9BP
  • RHO
  • RHO1
Sus scrofa (pig)
Inactivation of CSF3 (G-CSF) signaling
  • CSF3
  • CSF3R
  • HCK
  • JAK1
  • JAK2
  • LYN
  • TYK2
Sus scrofa (pig)
Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell
  • B2M
  • C3
  • CD1.1
  • CD1B
  • CD1D
  • CD200
  • CD200R1
  • CD22
  • CD226
  • CD247
  • CD300A
  • CD300C
  • CD300LF
  • CD300LG
  • CD3D
  • CD3E
  • CD3G
  • CD40
  • CD40LG
  • CD81
  • CD8A
  • CD8B
  • CD96
  • CLEC2B
  • CLEC4G
  • CRTAM
  • CXADR
  • DAP10
  • DAP12
  • FCGR2B
  • FCGR3A
  • HCST
  • ICAM1
  • ICAM2
  • ICAM4
  • ICAM5
  • IFITM1
  • IFITM3
  • IGKV5-2
  • ITGA4
  • ITGAL
  • ITGB1
  • ITGB2
  • ITGB7
  • JAML
  • KIR2DL1
  • KLRB1
  • KLRF1
  • KLRK1
  • LOC100125542
  • LOC100513601
  • LOC100513863
  • LOC100515551
  • LOC100515837
  • LOC100515852
  • LOC100519082
  • LOC100521998
  • LOC100523213
  • LOC100626247
  • LOC102161418
  • LOC110260307
  • LOC110261034
  • MADCAM1
  • NCR2
  • NECTIN2
  • NPDC1
  • OSCAR
  • PIANP
  • PILRA
  • PVR
  • SIGLEC1
  • SIGLEC5
  • SLA-2
  • SLA-3
  • SLA-6
  • SLA-7
  • SLA-8
  • SLAMF7
  • TNFRSF5
  • TREM1
  • TREM2
  • TREML2
  • TYROBP
  • ULBP1
  • VCAM1
  • cd1d
  • pCD1A
Sus scrofa (pig)
IRS-related events triggered by IGF1R
  • IGF1
  • IGF1R
  • IGF2
  • IRS1
  • IRS2
  • IRS4
Sus scrofa (pig)
IRS-mediated signalling
  • IRS1
  • IRS2
  • PIK3CA
  • PIK3CB
  • PIK3R1
  • PIK3R2
Sus scrofa (pig)
IFNG signaling activates MAPKs
  • IFNG
  • IFNGR1
  • IFNGR2
  • JAK1
  • JAK2
  • MAPK1
  • MAPK3
Sus scrofa (pig)
Hyaluronan uptake and degradation
  • CD44
  • GUSB
  • HEXA
  • HEXB
  • HMMR
  • HYAL1
  • HYAL2
  • LYVE1
  • SLC9A1
  • STAB2
Sus scrofa (pig)
Hyaluronan biosynthesis and export
  • ABCC5
  • CEMIP
  • HAS1
  • HAS3
  • SHAS2
  • shas3
Sus scrofa (pig)
Hormone ligand-binding receptors
  • CGA
  • FSHB
  • FSHR
  • GNRH
  • GNRH1
  • GNRH2
  • GNRHR
  • GNRHR2
  • LHB
  • LHCGR
  • TSHB
  • TSHR
Sus scrofa (pig)
Heme degradation
  • ABCC1
  • ABCC2
  • ABCG2
  • ABCG2A
  • ALB
  • BLVRA
  • BLVRB
  • BMDP
  • GSTA1
  • HMOX1
  • LOC100526118
  • SLCO1B2
  • SLCO1B3
  • SLCO2B1
  • UGT1A6
Sus scrofa (pig)
Heme biosynthesis
  • ABCG2
  • ABCG2A
  • ALAD
  • ALAS1
  • ALAS2
  • ALB
  • BMDP
  • COX10
  • COX15
  • CPOX
  • FECH
  • FLVCR1
  • HMBS
  • PPOX
  • UROD
  • UROS
Sus scrofa (pig)
HSF1-dependent transactivation
  • AKT1S1
  • CAMK2A
  • CAMK2B
  • CAMK2D
  • CAMK2G
  • CRYAB
  • HSBP1
  • HSF1
  • HSP90A
  • HSP90AA1
  • HSP90AB1
  • HSPA1B
  • HSPA1L
  • HSPA8
  • HSPB8
  • HSPCA
  • MLST8
  • MTOR
  • RPTOR
Sus scrofa (pig)
HS-GAG degradation
  • AGRN
  • GLB1
  • GLB1L
  • GLB1L2
  • GLB1L3
  • GPC1
  • GPC2
  • GPC3
  • GPC4
  • GPC5
  • GPC6
  • GUSB
  • HPSE
  • HPSE2
  • IDS
  • IDUA
  • NAGLU
  • SDC1
  • SDC2
  • SDC3
  • SDC4
  • SGSH
Sus scrofa (pig)
HS-GAG biosynthesis
  • AGRN
  • EXT1
  • EXT2
  • GPC1
  • GPC2
  • GPC3
  • GPC4
  • GPC5
  • GPC6
  • HS2ST1
  • HS3ST1
  • HS3ST2
  • HS3ST3A1
  • HS3ST3B1
  • HS3ST4
  • HS3ST5
  • HS3ST6
  • HS6ST1
  • HS6ST2
  • HS6ST3
  • NDST1
  • NDST2
  • NDST3
  • NDST4
  • SDC1
  • SDC2
  • SDC3
  • SDC4
  • SLC35D2
Sus scrofa (pig)
HDL clearance
  • APOA1
  • HDLBP
  • SCARB1
Sus scrofa (pig)
Growth hormone receptor signaling
  • GH1
  • JAK2
  • LYN
  • MAPK1
  • MAPK3
  • PRL
  • PRLR
  • PTPN1
  • SH2B1
Sus scrofa (pig)
Golgi Associated Vesicle Biogenesis
  • ACBD3
  • AP1B1
  • AP1G1
  • AP1M1
  • AP1M2
  • AP1S1
  • AP1S3
  • AP3B1
  • AP3S1
  • AP4B1
  • AP4E1
  • ARF1
  • ARRB1
  • BLOC1S3
  • BLOC1S6
  • CLTA
  • CLTC
  • CPD
  • DNM2
  • DTNBP1
  • GAK
  • GOLGB1
  • HIP1R
  • IGF2R
  • NAPA
  • NECAP1
  • OCRL
  • PICALM
  • PIK3C2A
  • PLDN
  • SNAPIN
  • SNX2
  • SNX5
  • SNX9
  • SORT1
  • TBC1D8B
  • TFRC
  • TPD52
  • TPD52L1
  • TXNDC5
  • VAMP2
  • VAMP8
  • YIPF6
Sus scrofa (pig)
Glycosphingolipid catabolism
  • ARSA
  • ARSB
  • ARSD
  • ARSG
  • ARSI
  • ARSJ
  • ARSK
  • ARSL
  • ASAH1
  • ASAH2
  • CTSA
  • ENPP7
  • GALC
  • GBA2
  • GBA3
  • GLA
  • GLB1
  • GLB1L
  • GLB1L2
  • GLB1L3
  • GM2A
  • HEXA
  • HEXB
  • LOC100621771
  • M6PR
  • NEU1
  • NEU2
  • NEU3
  • NEU4
  • PSAP
  • SMPD1
  • SMPD2
  • SMPD3
  • SMPD4
  • STS
  • SUMF1
  • SUMF2
Sus scrofa (pig)
Glycosphingolipid biosynthesis
  • A4GALT
  • B3GALNT1
  • B3GALT3
  • B3GALT4
  • B3GNT5
  • B4GALNT1
  • B4GALT5
  • B4GALT6
  • CERK
  • FUT1
  • FUT2
  • GAL3ST1
  • ST3GAL-III
  • ST3GAL2
  • ST3GAL3
  • ST3GAL5
  • ST6GALNAC5
  • ST6GALNAC6
  • ST8SIA5
  • UGCG
  • UGT8
Sus scrofa (pig)
Glycoprotein hormones
  • CGA
  • FSHB
  • INHA
  • INHBA
  • INHBB
  • INHBC
  • INHBE
  • LHB
  • TSHB
Sus scrofa (pig)
Glycolysis
  • ADPGK
  • ALDOA
  • ALDOB
  • ALDOC
  • BPGM
  • ENO2
  • ENO3
  • ENO4
  • GAPD
  • GAPDH
  • GAPDHS
  • GNPDA1
  • GPI
  • HK1
  • HK2
  • HK3
  • HKDC1
  • PFKL
  • PFKM
  • PFKP
  • PGAM1
  • PGAM2
  • PGK1
  • PGK2
  • PKLR
  • PKM
  • TPI1
Sus scrofa (pig)
Glycogen breakdown (glycogenolysis)
  • CALM3
  • GAA
  • GYG1
  • GYG2
  • PHKA1
  • PHKA2
  • PHKB
  • PHKG2
  • PYGL
  • PYGM
Sus scrofa (pig)
Glycerophospholipid catabolism
  • ENPP6
  • GDE1
  • PNPLA6
Sus scrofa (pig)
Glycerophospholipid biosynthesis
  • AGK
  • CPNE1
  • CPNE3
  • CPNE6
Sus scrofa (pig)

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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024