GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 226 - 250 of 360 in total
Pathway Name Protein Name UniProt ID ▲ Gene Symbol Organism GlyTouCan ID
GDP-fucose biosynthesis
  • FCSK
  • FUOM
  • GFUS
  • GMDS
  • SLC35C1
Sus scrofa (pig)
Hyaluronan uptake and degradation
  • CD44
  • GUSB
  • HEXA
  • HEXB
  • HMMR
  • HYAL1
  • HYAL2
  • LYVE1
  • SLC9A1
  • STAB2
Sus scrofa (pig)
Toll Like Receptor 4 (TLR4) Cascade
  • BPI
  • CD14
  • CD180
  • DNM1
  • DNM2
  • DNM3
  • ITGAM
  • ITGB2
  • LBP
  • LY64
  • LY86
  • LY96
  • PLCG2
  • TICAM2
  • TLR4
Sus scrofa (pig)
MyD88:MAL(TIRAP) cascade initiated on plasma membrane
  • ECSIT
  • MAP3K1
  • TIRAP
  • TRAF6
Sus scrofa (pig)
Non-integrin membrane-ECM interactions
  • DDR1
  • DDR2
Sus scrofa (pig)
Platelet sensitization by LDL
  • APOB
  • ApoER2
  • LRP8
  • MAPK14
  • PECAM1
  • PPP2CA
  • PPP2CB
  • PPP2R1A
  • PPP2R1B
  • PPP2R5A
  • PPP2R5B
  • PPP2R5C
  • PPP2R5D
  • PTPN11
Sus scrofa (pig)
Ciprofloxacin ADME
  • ABCG2
  • ABCG2A
  • ALB
  • BMDP
  • SLC22A1
  • SLCO1A2
Sus scrofa (pig)
Neurotransmitter clearance
  • ACHE
  • OCT2
  • SLC22A1
  • SLC22A2
Sus scrofa (pig)
Abacavir transmembrane transport
  • OCT2
  • SLC22A1
  • SLC22A2
  • SLC22A3
Sus scrofa (pig)
PI3K Cascade
  • FGF1
  • FGF10
  • FGF16
  • FGF18
  • FGF19
  • FGF2
  • FGF20
  • FGF22
  • FGF23
  • FGF3
  • FGF4
  • FGF5
  • FGF6
  • FGF8
  • FGF9
  • FGFR1
  • FGFR4
  • FLT3
  • FLT3LG
  • Fgf4
  • GAB1
  • GAB2
  • GRB2
  • IRS1
  • IRS2
  • KL
  • KLB
  • PIK3C3
  • PIK3CA
  • PIK3CB
  • PIK3R1
  • PIK3R2
  • PIK3R4
  • PTPN11
  • TLR9
Sus scrofa (pig)
PI-3K cascade:FGFR1
  • FGF1
  • FGF10
  • FGF2
  • FGF20
  • FGF22
  • FGF23
  • FGF3
  • FGF4
  • FGF5
  • FGF6
  • FGF8
  • FGF9
  • FGFR1
  • Fgf4
  • GAB1
  • GRB2
  • KL
  • PIK3CA
  • PIK3R1
  • PTPN11
Sus scrofa (pig)
Phospholipase C-mediated cascade: FGFR1
  • FGF1
  • FGF10
  • FGF2
  • FGF20
  • FGF22
  • FGF23
  • FGF3
  • FGF4
  • FGF5
  • FGF6
  • FGF8
  • FGF9
  • FGFR1
  • Fgf4
  • KL
  • PLCG1
Sus scrofa (pig)
FGFR1c ligand binding and activation
  • ANOS1
  • FGF1
  • FGF2
  • FGF20
  • FGF23
  • FGF4
  • FGF5
  • FGF6
  • FGF8
  • FGF9
  • FGFR1
  • Fgf4
  • TGFBR3
Sus scrofa (pig)
Signaling by Activin
  • ACVR1B
  • ACVR1C
  • ACVR2A
  • ACVR2B
  • INHA
  • INHBA
  • INHBB
  • MADH3
  • MADH4
  • MAPK1
  • MAPK3
  • SMAD2
  • SMAD3
  • SMAD4
  • TGFBR3
Sus scrofa (pig)
O-linked glycosylation
  • B3GALNT2
  • B4GAT1
  • DAG1
  • LARGE1
  • LARGE2
  • POMGNT1
  • POMGNT2
  • POMK
  • POMT1
  • POMT2
Sus scrofa (pig)
Degradation of the extracellular matrix
  • A2M
  • ACAN
  • ADAM10
  • ADAM15
  • ADAM8
  • ADAMTS4
  • ADAMTS5
  • BCAN
  • BSG
  • CAPN1
  • CAPN10
  • CAPN11
  • CAPN12
  • CAPN13
  • CAPN14
  • CAPN15
  • CAPN2
  • CAPN4
  • CAPN5
  • CAPN6
  • CAPN7
  • CAPN8
  • CAPN9
  • CAPNS1
  • CAST
  • CD44
  • CDH1
  • DCN
  • HTRA1
  • KLK7
  • LOC100154047
  • MMP1
  • MMP11
  • MMP12
  • MMP13
  • MMP19
  • MMP20
  • MMP3
  • MMP7
  • MMP8
  • MMP9
  • NID1
  • OPN
  • OPTC
  • SCUBE1
  • SCUBE3
  • SPP1
  • TMPRSS6
Sus scrofa (pig)
Sulfur amino acid metabolism
  • AHCY
  • BHMT
  • BHMT2
  • MAT1A
  • MTR
  • MTRR
  • bhmt
Sus scrofa (pig)
Synthesis of Leukotrienes (LT) and Eoxins (EX)
  • ABCC1
  • ALOX15
  • ALOX5
  • CYP4A21
  • CYP4A23
  • CYP4A24
  • CYP4A90
  • CYP4B1
  • CYP4F22
  • CYP4F3
  • CYP4F52
  • DPEP1
  • DPEP2
  • DPEP3
  • GGT1
  • LOC110255311
  • LOC110259328
  • LOC110259329
  • LTA4H
  • LTC4S
  • MAPKAPK2
  • RDP
Sus scrofa (pig)
Heme degradation
  • ABCC1
  • ABCC2
  • ABCG2
  • ABCG2A
  • ALB
  • BLVRA
  • BLVRB
  • BMDP
  • GSTA1
  • HMOX1
  • LOC100526118
  • SLCO1B2
  • SLCO1B3
  • SLCO2B1
  • UGT1A6
Sus scrofa (pig)
Transferrin endocytosis and recycling
  • ATP6AP1
  • ATP6G2
  • ATP6V0A1
  • ATP6V0B
  • ATP6V0C
  • ATP6V0D1
  • ATP6V0D2
  • ATP6V0E2
  • ATP6V1B1
  • ATP6V1C1
  • ATP6V1C2
  • ATP6V1E1
  • ATP6V1G2
  • ATP6V1H
  • HFE
  • MCOLN1
  • STEAP3
  • STEAP4
  • TCIRG1
  • TF
  • TFR2
  • TFRC
Sus scrofa (pig)
Ion channel transport
  • ATP6AP1
  • ATP6G2
  • ATP6V0A1
  • ATP6V0B
  • ATP6V0C
  • ATP6V0D1
  • ATP6V0D2
  • ATP6V0E2
  • ATP6V1B1
  • ATP6V1C1
  • ATP6V1C2
  • ATP6V1E1
  • ATP6V1G2
  • ATP6V1H
  • TCIRG1
Sus scrofa (pig)
Ovarian tumor domain proteases
  • APC
  • CDK1
  • ESR
  • ESR1
  • NR3A1
  • OTUB1
  • OTUB2
  • OTUD3
  • OTUD7A
  • OTUD7B
  • P53
  • PTEN
  • RHOA
  • RIPK1
  • RNF128
  • RPS27A
  • TNFAIP3
  • TNIP1
  • TNIP2
  • TNIP3
  • TP53
  • TRAF3
  • TRAF6
  • UBA52
  • UBB
  • UBC
  • UBE2D1
  • VCPIP1
  • YOD1
  • ZRANB1
Sus scrofa (pig)
TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation
  • ECSIT
  • MAP3K1
  • TRAF6
Sus scrofa (pig)
MyD88 cascade initiated on plasma membrane
  • ECSIT
  • MAP3K1
  • TRAF6
Sus scrofa (pig)
PECAM1 interactions
  • FYN
  • INPP5D
  • ITGAV
  • ITGB3
  • LCK
  • LYN
  • PECAM1
  • PLCG1
  • PTPN11
  • SRC
  • YES1
Sus scrofa (pig)

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Last updated: August 19, 2024