GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **76 - 100** of **360** in total

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Pathway Name	Protein Name	UniProt ID ▼	Gene Symbol	Organism	GlyTouCan ID
Atorvastatin ADME	ABC-type glutathione-S-conjugate transporter Cytochrome P450 3A Cytochrome P450 3A Cytochrome P450 3A Multidrug resistance protein 1 Paraoxonase Paraoxonase Solute carrier organic anion transporter family member Solute carrier organic anion transporter family member glucuronosyltransferase	A0A287AWR7 A0A287B7I8 A0A8W4FMT0 F1S8V9 F1SBZ0 F1SM17 F1SUN1 F6KQD9 I3LA57 I3LEX8	ABCC2 CYP3A22 CYP3A227 CYP3A29 LOC100522267 PON1 PON3 SLCO1B2 SLCO1B3 SLCO2B1 UGT1A6	Sus scrofa (pig)
Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)	Dipeptidyl peptidase 4 Free fatty acid receptor 4 G protein subunit beta 3 G protein-coupled receptor 119 Gastrin-releasing peptide Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 Leptin Pro-glucagon	A0A287AW90 E7EDN1 F1RTG3 F1SLU8 P01274 P22411 P63153 Q29406	CD26 DPP4 FFAR4 GCG GNB1 GNB3 GPR119 GPR120 GRP LEP O3FAR1 OB OBS	Sus scrofa (pig)	G58161NS
Activation of the phototransduction cascade	Cyclic nucleotide gated channel subunit beta 1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 Phosphodiesterase Rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma Rhodopsin cGMP-gated cation channel alpha-1	A0A287AW90 A0A5G2R841 A0A8W4FII8 F1RF40 F1RL89 O18766	CNGA1 CNGB1 GNB1 PDE6A PDE6G RHO RHO1	Sus scrofa (pig)
Toll Like Receptor 9 (TLR9) Cascade	Early endosome antigen 1 Phosphatidylinositol 3-kinase catalytic subunit type 3 Rabenosyn, RAB effector Toll-like receptor 9 non-specific serine/threonine protein kinase	A0A287AVI7 A0A287BHR8 A0A5G2RJ76 F1SAI0 Q5I2M3	EEA1 PIK3C3 PIK3R4 RBSN TLR9	Sus scrofa (pig)
Downregulation of TGF-beta receptor signaling	BMP and activin membrane-bound inhibitor homolog E3 ubiquitin-protein ligase CHIP E3 ubiquitin-protein ligase Mothers against decapentaplegic homolog 3 Mothers against decapentaplegic homolog Mothers against decapentaplegic homolog Polyubiquitin-C Prostate transmembrane protein, androgen induced 1 Serine/threonine-protein kinase receptor TGF-beta receptor type-1 Transforming growth factor beta-1 proprotein Ubiquitin B Ubiquitin C Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein protein-tyrosine-phosphatase	A0A287ATZ7 A0A287AZA7 A0A287BBB7 A0A287BE69 A0A287BGG6 A0A287BLR9 A0A287BQ73 A0A2C9F3G2 A0A5G2RC56 A7U5U2 E9LHE5 F1CK19 F1S911 P07200 P0CG68 P84024	BAMBI MADH3 MTMR4 PMEPA1 RPS27A SMAD2 SMAD3 SMAD7 SMURF2 STUB1 Smad7 TGFB1 TGFBR1 TGFBR2 UBA52 UBB UBC bambi	Sus scrofa (pig)
Lectin pathway of complement activation	Collectin subfamily member 10 Collectin-11 Ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin) Ficolin (collagen/fibrinogen domain containing) 1 MBL associated serine protease 1 MBL associated serine protease 2 Mannose-binding protein C	A0A287ATF0 A0A5G2QE59 A0A5G2QFX9 A0A5G2QP75 A0A8W4FNY0 I3LEW0 K7GKU8	COLEC10 COLEC11 FCN1 FCN2 MASP1 MASP2 MBL2	Sus scrofa (pig)	G49108TO G57321FI
Vitamin B2 (riboflavin) metabolism	Ectonucleotide pyrophosphatase/phosphodiesterase 1 FAD synthase Riboflavin transporter Riboflavin transporter Tartrate-resistant acid phosphatase type 5 riboflavin kinase	A0A287AT99 A0A480TEK5 A0A5G2RJ73 F1RSN6 F1S866 P09889	ACP5 ENPP1 FLAD1 RFK SLC52A1 SLC52A2 SLC52A3	Sus scrofa (pig)
Fructose biosynthesis	Aldo-keto reductase family 1 member B1 Sorbitol dehydrogenase	A0A287AT21 A0A5G2R274	AKR1B1 SORD	Sus scrofa (pig)	G58161NS
Transport of bile salts and organic acids, metal ions and amine compounds	Choline transporter-like protein 2 Choline transporter-like protein 4 Choline transporter-like protein Choline transporter-like protein Multidrug and toxin extrusion protein Multidrug and toxin extrusion protein Solute carrier family 10 member 6 Solute carrier family 14 member 2 Urea transporter 1	A0A287ARM7 A0A287BPI3 A0A8W4FLB7 A5PF08 F1RQG4 F1S542 F1S584 F1SDC6 I3LIG7	CTL2 CTL4 SLC10A6 SLC14A1 SLC14A2 SLC44A1 SLC44A2 SLC44A3 SLC44A4 SLC47A1 SLC47A2 TPPT1	Sus scrofa (pig)
Inhibition of TSC complex formation by PKB	TSC complex subunit 1 TSC complex subunit 2 non-specific serine/threonine protein kinase	A0A287AQP0 A0A287BG63 A0A5G2RE18	AKT2 TSC1 TSC2	Sus scrofa (pig)
Calcitonin-like ligand receptors	Adrenomedullin 2 Calcitonin receptor-stimulating peptide 3 Calcitonin receptor Calcitonin Pro-adrenomedullin Receptor activity modifying protein 2 Receptor activity-modifying protein 1 Receptor activity-modifying protein 3	A0A287AQ81 A0A8W4FIA2 A6P7L6 F6PWN2 P25117 P53366 Q766Y6 Q867C0	ADM ADM2 AM CALCB CALCR CRSP3 RAMP1 RAMP2 RAMP3	Sus scrofa (pig)
TFAP2 (AP-2) family regulates transcription of growth factors and their receptors	ATPase family AAA domain containing 2 Estrogen receptor Glycoprotein hormones alpha chain Lutropin subunit beta	A0A287AQ37 P01219 P01232 Q29040	ATAD2 CGA ESR ESR1 LHB NR3A1	Sus scrofa (pig)
Lewis blood group biosynthesis	Alpha-(1,3)-fucosyltransferase Alpha-(1,3)-fucosyltransferase Alpha2,3-sialyltransferase CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform 4 Fucosyltransferase Fucosyltransferase Fucosyltransferase Galactoside alpha-(1,2)-fucosyltransferase 2 Glycosyltransferase 2-like domain-containing protein Hexosyltransferase Hexosyltransferase Hexosyltransferase ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 Type 2 lactosamine alpha-2,3-sialyltransferase	A0A287AMU7 A0A287B633 A0A287B819 A0A287BIT3 A0A287BS10 A0A8W4FN42 F1RS05 F1RZT4 F1S6H2 F1SAB1 F1SBU3 I3L7N4 Q10982 Q70D54	B3GALT1 B3GALT2 B3GALT4 FUT10 FUT11 FUT2 FUT4 FUT7 LOC100513844 LOC110255214 ST3GAL-III ST3GAL3 ST3GAL4 ST3GAL6 ST6GALNAC6	Sus scrofa (pig)	G39211DH G81971FM G83633HB G90387AM G98173LG
Elastic fibre formation	Elastin Fibrillin 2 Fibrillin 3 Fibulin-5 Lysyl oxidase homolog Lysyl oxidase homolog Lysyl oxidase homolog Microfibril associated protein 2 Microfibril associated protein 5 furin protein-lysine 6-oxidase protein-lysine 6-oxidase	A0A287AM88 A0A287AXU0 A0A5G2QM06 A0A5G2QNS3 A0A5G2R2Y0 F1RLC4 F1RMJ1 F1S8X0 F1SD87 F1SIC9 F1SNV7 I3LI73	ELN FBLN5 FBN2 FBN3 FURIN LOX LOXL1 LOXL2 LOXL3 LOXL4 MFAP2 MFAP5	Sus scrofa (pig)
Apoptotic cleavage of cell adhesion proteins	Cadherin-1 Catenin beta-1 Desmoglein 1 Desmoglein 2 Desmoglein 3 Desmoglein-1 Desmoplakin Occludin Plakophilin 1 Tight junction protein 1 Tight junction protein 2	A0A287AL69 A0A287AQX9 A0A287ATF2 A0A287BF71 F1RW75 F6QAP1 I3L5Z1 I3LA65 I3LGN8 I3LU54 Q3BDI7	CDH1 CTNNB1 DSG1 DSG2 DSG3 DSP OCLN PKP1 TJP1 TJP2	Sus scrofa (pig)
Electric Transmission Across Gap Junctions	Gap junction gamma-1 protein Gap junction protein Gap junction protein Pannexin Pannexin	A0A287AL56 A0A287B8K3 A4GVD1 F1RXR8 F1RY20	GJA10 GJA7 GJC1 GJD2 PANX PANX1 PANX2	Sus scrofa (pig)
NTRK2 activates RAC1	Brain-derived neurotrophic factor Dedicator of cytokinesis 3 Ras-related C3 botulinum toxin substrate 1 Tyrosine-protein kinase Fyn	A0A287AKJ4 A0A8W4FI56 A1Y2K1 P14082	BDNF DOCK3 FYN RAC1	Sus scrofa (pig)
TNF receptor superfamily (TNFSF) members mediating non-canonical NF-kB pathway	B-cell activating factor Baculoviral IAP repeat containing 2 CD40 ligand Lymphotoxin beta receptor Lymphotoxin-alpha Lymphotoxin-beta Mitogen-activated protein kinase kinase kinase 14 Putative inhibitor of apoptosis TNF receptor superfamily member 11a TNF receptor superfamily member 12A TNF receptor superfamily member 13C TNF receptor-associated factor TNF receptor-associated factor TNF superfamily member 11 TNF superfamily member 12 Tumor necrosis factor receptor superfamily member 5	A0A287AJ47 A0A287AWB6 A0A5G2Q934 A0A8W4FAU5 A0A8W4FCV1 A0MTC9 F1RJX1 F1RR25 F1RVZ4 I3L7R8 I3L871 I3LH37 K7GN73 O62640 P26445 Q8SQ34	BIRC2 CD40 CD40LG LTA LTB LTBR MAP3K14 PIAP TNFB TNFRSF11A TNFRSF12A TNFRSF13C TNFRSF5 TNFSF1 TNFSF11 TNFSF12 TNFSF13B TRAF2 TRAF3	Sus scrofa (pig)
Regulation of CDH11 function	ADAM metallopeptidase domain 19 ADAM metallopeptidase domain 33 Angiomotin Angiopoietin-related protein 4 Cadherin 11 Catenin beta-1 Catenin delta 1 Junction plakoglobin Junction plakoglobin	A0A287AHV9 A0A287ASR6 A0A2C9F3E9 A0A5G2QJC4 F1RFU7 F1RWT7 F6QAP1 Q2TNK5 Q8WNW3	ADAM19 ADAM33 AMOT ANGPTL4 CDH11 CTNNB1 CTNND1 JUP Jup PGAR	Sus scrofa (pig)
trans-Golgi Network Vesicle Budding	ADP-ribosylation factor 1 Golgi brefeldin A resistant guanine nucleotide exchange factor 1 Synaptosomal-associated protein Syntaxin 4 Vesicle-associated membrane protein 2 Vesicle-associated membrane protein 8	A0A287AHK8 A0A5G2R276 A0A8W4F8A7 A0A8W4FA01 A0A8W4FPV1 F1RIR2	ARF1 GBF1 SNAP23 STX4 VAMP2 VAMP8	Sus scrofa (pig)
Metabolism of steroid hormones	Sulfatase N-terminal domain-containing protein	A0A287AGF2	STS	Sus scrofa (pig)
Inactivation, recovery and regulation of the phototransduction cascade	Calmodulin 3 Calmodulin-lysine N-methyltransferase Cyclic nucleotide gated channel subunit beta 1 G protein-coupled receptor kinase G protein-coupled receptor kinase Glycylpeptide N-tetradecanoyltransferase Glycylpeptide N-tetradecanoyltransferase Guanine nucleotide-binding protein subunit beta-5 Guanylate cyclase Guanylyl cyclase-activating protein 2 Methionine aminopeptidase 2 Methionine aminopeptidase Phosphodiesterase Recoverin Regulator of G-protein signaling 9-binding protein Regulator of G-protein signaling 9 Rhodopsin kinase GRK7 Rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma Rhodopsin Serine/threonine-protein phosphatase with EF-hands cGMP-gated cation channel alpha-1	A0A287AGE9 A0A287AL00 A0A287BB66 A0A480L5Q2 A0A5G2QFC3 A0A5G2QWK6 A0A5G2R841 A0A8W4FII8 F1RF40 F1RL89 F1RN35 F1RR06 F1RUU3 F1S5K4 F1S8P7 I3LJL1 I3LR47 I3LSP1 I3LTH3 O18766 Q8WP15	CALM3 CAMKMT CNGA1 CNGB1 GNB5 GRK1 GRK4 GRK7 GUCA1B GUCY2D METAP1 METAP2 NMT1 NMT2 PDE6A PDE6G PPEF1 RCVRN RGS9 RGS9BP RHO RHO1	Sus scrofa (pig)
Scavenging by Class H Receptors	Apolipoprotein B SPARC SPARC Stabilin 1 Stabilin 2	A0A287AG13 A0A287BJE5 A0A5G2R6P1 F1SRK1 P20112	APOB SPARC STAB1 STAB2	Sus scrofa (pig)
RIPK1-mediated regulated necrosis	Flotillin-1 Flotillin Mixed lineage kinase domain like pseudokinase Programmed cell death 6 interacting protein Receptor interacting serine/threonine kinase 1 Syndecan binding protein non-specific serine/threonine protein kinase	A0A287AG10 A0A287AH24 A0A287ALN0 A0A287BRT1 A0A5G2R6P0 F1SGQ6 Q767L6	FLOT1 FLOT2 MLKL PDCD6IP RIPK1 RIPK3 SDCBP	Sus scrofa (pig)
Regulation of necroptotic cell death	Baculoviral IAP repeat containing 2 Caspase-8 E2 ubiquitin-conjugating enzyme E3 ubiquitin-protein ligase CHIP FAS-associated death domain protein Flotillin-1 Flotillin Heat shock protein HSP 90-alpha Heat shock protein HSP 90-alpha Hsp90 co-chaperone Cdc37 Mixed lineage kinase domain like pseudokinase Polyubiquitin-C Programmed cell death 6 interacting protein Putative inhibitor of apoptosis Receptor interacting serine/threonine kinase 1 Syndecan binding protein TNF receptor-associated factor Tumor necrosis factor receptor type 1-associated DEATH domain protein Ubiquitin B Ubiquitin C Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein non-specific serine/threonine protein kinase	A0A287AG10 A0A287AH24 A0A287ALN0 A0A287AZA7 A0A287BGG6 A0A287BPE4 A0A287BRT1 A0A2C9F3G2 A0A5G2QUT6 A0A5G2R6P0 A0A8I8C3K7 A7U5U2 F1RVZ4 F1S911 F1SGQ6 I3LH37 O02705 O62640 P0CG68 Q56VC2 Q56VC3 Q684M6 Q767L6	BIRC2 CASP8 CDC37 FADD FLOT1 FLOT2 HSP90A HSP90AA1 HSPCA MLKL PDCD6IP PIAP RIPK1 RIPK3 RPS27A SDCBP STUB1 TNFRSF6 TRADD TRAF2 UBA52 UBB UBC UBE2L3	Sus scrofa (pig)

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